Knowledge

Methyltransferase

Source đź“ť

354: 469:
these atoms are modified, with O-methyltransferases representing the largest class. The methylated products of these reactions serve a variety of functions, including co-factors, pigments, signalling compounds, and metabolites. NPMTs can serve a regulatory role by modifying the reactivity and availability of these compounds. These enzymes are not highly conserved across different species, as they serve a more specific function in providing small molecules for specialized pathways in species or smaller groups of species. Reflective of this diversity is the variety of catalytic strategies, including general
485: 41: 241: 298: 681: 98:(SAH) during this process. The breaking of the SAM-methyl bond and the formation of the substrate-methyl bond happen nearly simultaneously. These enzymatic reactions are found in many pathways and are implicated in genetic diseases, cancer, and metabolic diseases. Another type of methyl transfer is the radical S-Adenosyl methionine (SAM) which is the methylation of unactivated carbon atoms in primary metabolites, proteins, lipids, and RNA. 2493: 33: 461: 655:
translational fidelity and RlmN catalyzes methylation of C2 of adenosine 2503 (A2503) in 23 S rRNA and C2 of adenosine (A37). Cfr, on the other hand, catalyzes methylation of C8 of A2503 as well and it also catalyzes C2 methylation. Class B is currently the largest class of radical SAM methylases which can methylate both
784:
In human cells, it was found that m5C was associated with abnormal tumor cells in cancer. The role and potential application of m5C includes to balance the impaired DNA in cancer both hypermethylation and hypomethylation. An epigenetic repair of DNA can be applied by changing the m5C amount in both
468:
Natural product methyltransferases (NPMTs) are a diverse group of enzymes that add methyl groups to naturally-produced small molecules. Like many methyltransferases, SAM is utilized as a methyl donor and SAH is produced. Methyl groups are added to S, N, O, or C atoms, and are classified by which of
381:
as a methyl donor and contain several highly conserved structural features between the three forms; these include the S-adenosylmethionine binding site, a vicinal proline-cysteine pair which forms a thiolate anion important for the reaction mechanism, and the cytosine substrate binding pocket. Many
654:
Based on different protein structures and mechanisms of catalysis, there are 3 different types of radical SAM (RS) methylases: Class A, B, and C. Class A RS methylases are the best characterized of the 4 enzymes and are related to both RlmN and Cfr. RlmN is ubiquitous in bacteria which enhances
667:
2-hybridized carbon atoms. The main difference that distinguishes Class B from others is the additional N-terminal cobalamin-binding domain that binds to the RS domain. Class C methylase has homologous sequence with the RS enzyme, coproporphyrinogen III oxidase (HemN), which also catalyzes the
275:, allowing other proteins to recognize methyl marks. The effect of this modification depends on the location of the modification on the histone tail and the other histone modifications around it. The location of the modifications can be partially determined by DNA sequence, as well as small 1227:
Narva, Kenneth E.; Van Etten, James L.; Slatko, Barton E.; Benner, Jack S. (1988-12-25). "The amino acid sequence of the eukaryotic DNA methyltransferase M·CviBIII, has regions of similarity with the prokaryotic isoschizomer M · TaqI and other DNA methyltransferases".
70:, and class III methyltransferases, which are membrane associated. Methyltransferases can also be grouped as different types utilizing different substrates in methyl transfer reactions. These types include protein methyltransferases, DNA/RNA methyltransferases, 448:
m6A was primarily found in prokaryotes until 2015 when it was also identified in some eukaryotes. m6A methyltransferases methylate the amino group in DNA at C-6 position specifically to prevent the host system to digest own genome through restriction enzymes.
226:
Natural product methyltransferases provide a variety of inputs into metabolic pathways, including the availability of cofactors, signalling molecules, and metabolites. This regulates various cellular pathways by controlling protein activity.
288:
condensation, while decreased transcription results from increased chromatin condensation. Methyl marks on the histones contribute to these changes by serving as sites for recruitment of other proteins that can further modify chromatin.
426:
as well as viral RNA species. Specific RNA methyltransferases are employed by cells to mark these on the RNA species according to the need and environment prevailing around the cells, which form a part of field called molecular
74:
methyltransferases, and non-SAM dependent methyltransferases. SAM is the classical methyl donor for methyltransferases, however, examples of other methyl donors are seen in nature. The general mechanism for methyl transfer is a
178:. The RCC1-chromatin interaction is also an example of a protein-DNA interaction, as another domain of RCC1 interacts directly with DNA when this protein is methylated. When RCC1 is not methylated, dividing cells have multiple 270:
substrates. Lysine amino acids can be modified with one, two, or three methyl groups, while Arginine amino acids can be modified with one or two methyl groups. This increases the strength of the positive charge and residue
188:
methylated on lysine to regulate its activation and interaction with other proteins in the DNA damage response. This is an example of regulation of protein-protein interactions and protein activation. p53 is a known
700:. Cancer cells typically exhibit less DNA methylation activity in general, though often hypermethylation at sites which are unmethylated in normal cells; this overmethylation often functions as a way to inactivate 764:(SAM) analogs that carry alternative alkyl groups as a replacement for methyl. The development of the facile chemoenzymatic platform to generate and utilize differentially alkylated SAM analogs in the context of 1528:"Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods" 279:
and the methylation of the DNA itself. Most commonly, it is histone H3 or H4 that is methylated in vertebrates. Either increased or decreased transcription of genes around the modification can occur. Increased
827: 689: 452:
m5C plays a role to regulate gene transcription. m5C transferases are the enzymes that produce C5-methylcytosine in DNA at C-5 position of cytosine and are found in most plants and some eukaryotes.
353: 325:, or Proline. This reaction yields a methylated protein and SAH. Known targets of these methyltransferases in humans include RCC-1 (a regulator of nuclear transport proteins) and 708:
substrates, have been found to be highly toxic due to their similarity to cytosine (see right); this similarity to the nucleotide causes the inhibitor to be incorporated into
55:
their substrates but can be split into several subclasses based on their structural features. The most common class of methyltransferases is class I, all of which contain a
1992: 1783: 934:"Lysine methylation of the NF-ÎşB subunit RelA by SETD6 couples activity of the histone methyltransferase GLP at chromatin to tonic repression of NF-ÎşB signaling" 812: 266:
group on histone tails. Lysine methyltransferases and Arginine methyltransferases are unique classes of enzymes, but both bind SAM as a methyl donor for their
1184:
Kessler, Christoph; Manta, Vicentiu (1990-01-01). "Specificity of restriction endonucleases and DNA modification methyltransferases — a review (edition 3)".
785:
types of cancer cells (hypermethylation/ hypomethylation) and as well as the environment of the cancers to reach an equivalent point to inhibit tumor cells.
205:. Overall, it responds to mutations in DNA, signaling to the cell to fix them or to initiate cell death so that these mutations cannot contribute to cancer. 301:
Representative scheme of reaction catalyzed by N-alpha methyltransferases, with representative substrate. The N-terminal residue that is modified is Serine.
1624:
Singh, S; Zhang, J; Huber, TD; Sunkara, M; Hurley, K; Goff, RD; Wang, G; Zhang, W; Liu, C; Rohr, J; Van Lanen, SG; Morris, AJ; Thorson, JS (7 April 2014).
773: 1314:
Liscombe, David K.; Louie, Gordon V.; Noel, Joseph P. (2012). "Architectures, mechanisms and molecular evolution of natural product methyltransferases".
688:
As with any biological process which regulates gene expression and/or function, anomalous DNA methylation is associated with genetic disorders such as
1823: 170:
of chromosomes. This is an example of regulation of protein-protein interaction, as methylation regulates the attachment of RCC1 to histone proteins
474: 2024: 2082: 139:
to the gene itself. Though the mechanisms of this genetic control are complex, hypo- and hypermethylation of DNA is implicated in many diseases.
394:. Many of the early DNA methyltransferases have been thought to be derived from RNA methyltransferases that were supposed to be active in the 1978: 1879: 2042: 1948: 2143: 36:
SET7/9, a representative histone methyltransferase with SAM (blue) and peptide undergoing methylation (black). Rendered from PDB: 4J83.
704:. Inhibition of overall DNA methyltransferase activity has been proposed as a treatment option, but DNMT inhibitors, analogs of their 1585:"Resistance to linezolid is mediated by the cfr gene in the first report of an outbreak of linezolid-resistant Staphylococcus aureus" 2167: 1922: 1845: 1583:
Morales G, Picazo JJ, Baos E, Candel FJ, Arribi A, Peláez B, Andrade R, de la Torre MA, Fereres J, Sánchez-García M (March 2010).
733:: defects in this gene causes toxic accumulation of thiopurine compounds, drugs used in chemotherapy and immunosuppressant therapy 1271:
Posfai, Janos; Bhagwat, Ashok S.; Roberts, Richard J. (1988-12-25). "Sequence motifs specific for cytosine methyltransferases".
2153: 1869: 553: 1771: 1816: 2107: 1777: 377:, including DNMT1, DNMT2 (renamed TRDMT1 to reflect its function methylating tRNA, not DNA), and DNMT3. These enzymes use 2179: 1899: 1895: 760:
Recent work has revealed the methyltransferases involved in methylation of naturally occurring anticancer agents to use
990: 2212: 1366: 439:
methylation, m1G methylation as well as m5C are most commonly methylation marks observed in different types of RNA.
2063: 1809: 1789: 398:
to protect many species of primitive RNA. RNA methylation has been observed in different types of RNA species viz.
2138: 2019: 329:(a tumor suppressor protein that inhibits excessive cell division). RCC-1 methylation is especially important in 317:-Lysine consensus sequence is recognized by the methyltransferase. For all known substrates, the X amino acid is 148: 2128: 2123: 2047: 1927: 2368: 1904: 1864: 565: 387: 132: 223:, making methylation of NF-ÎşB a regulatory process by which cell signaling through this pathway is reduced. 2133: 1973: 1766: 1626:"Facile chemoenzymatic strategies for the synthesis and utilization of S-adenosyl-(L)-methionine analogues" 797: 730: 672:
2-hybridized carbon centers yet it lacks the 2 cysteines required for methylation in mechanism of Class A.
573: 627:
are all methyl donors found in biology as methyl group donors, typically in enzymatic reactions using the
481:
not requiring catalytic amino acids. NPMTs are the most functionally diverse class of methyltransferases.
2148: 1098:
Lan, J; Hua, S; He, X; Zhang, Y (2010). "DNA methyltransferases and methyl-binding proteins of mammals".
152: 390:, there are a variety of protein complexes, many with implications for human health, which only bind to 44:
The SN2-like methyl transfer reaction. Only the SAM cofactor and cytosine base are shown for simplicity.
2483: 1795: 2469: 2456: 2443: 2430: 2417: 2404: 2391: 2353: 1958: 1874: 807: 361:
DNA methylation, a key component of genetic regulation, occurs primarily at the 5-carbon of the base
248: 92: 67: 17: 2363: 2317: 2260: 2011: 1836: 1760: 281: 116: 357:
5'-methylcytosine molecule with methyl group, added by a DNA methyltransferase, highlighted in red
2265: 748: 723:
vectors capable of transmitting this gene are a cause of potentially dangerous cross resistance.
628: 620: 1801: 2068: 326: 1756: 663:
3-hybridized carbon atoms in different sets of substrates unlike Class A which only catalyzes
2286: 2205: 1968: 802: 761: 709: 701: 378: 374: 66:(SAM). Class II methyltransferases contain a SET domain, which are exemplified by SET domain 60: 211:(a protein involved in inflammation) is a known methylation target of the methyltransferase 2518: 2358: 1963: 1526:
Sofia, H. J.; Chen, G.; Hetzler, B. G.; Reyes-Spindola, J. F.; Miller, N. E. (2001-03-01).
391: 341:. When RCC-1 is not methylated, cell division is abnormal following the formation of extra 849:"Automated identification of putative methyltransferases from genomic open reading frames" 445:
S-adenosyl-L-methionine + DNA adenine S-adenosyl-L-homocysteine + DNA 6-methylaminopurine
386:
throughout many classes of life, from bacteria to mammals. In addition to controlling the
8: 2322: 1932: 822: 817: 736: 432: 1674: 2255: 1650: 1625: 1503: 1468: 1358: 1161: 1134: 1080: 1032: 1007: 958: 933: 697: 383: 120: 159: 40: 2513: 2034: 1735: 1694: 1686: 1655: 1606: 1565: 1560: 1547: 1527: 1508: 1490: 1362: 1331: 1296: 1288: 1284: 1253: 1245: 1241: 1209: 1201: 1197: 1166: 1115: 1072: 1037: 986: 963: 914: 870: 740: 342: 179: 1798:
Genetic pathways involving Histone Methyltransferases from Cell Signaling Technology
635: 2301: 2296: 2270: 2198: 1725: 1645: 1637: 1596: 1555: 1539: 1498: 1480: 1469:"Mechanistic Diversity of Radical S-Adenosylmethionine (SAM)-dependent Methylation" 1354: 1323: 1280: 1237: 1193: 1156: 1146: 1107: 1064: 1027: 1019: 953: 945: 904: 860: 769: 600: 366: 338: 190: 87:
sulfur serves as the leaving group and the methyl group attached to it acts as the
1135:"Reviving the RNA World: An Insight into the Appearance of RNA Methyltransferases" 1084: 2348: 2332: 2245: 2086: 478: 71: 2497: 2386: 2327: 1730: 1713: 1448: 1426: 1404: 1382: 865: 848: 765: 639: 612: 581: 557: 470: 276: 272: 128: 345:. The function of Retinoblastoma protein N-terminal methylation is not known. 244:
General scheme of the reaction catalyzed by a lysine histone methyltransferase
2507: 2291: 2250: 1996: 1772:
A novel methyltransferase : the 7SK snRNA Methylphosphate Capping Enzyme
1690: 1551: 1494: 1292: 1249: 1205: 1151: 693: 624: 608: 484: 240: 91:
that transfers the methyl group to the enzyme substrate. SAM is converted to
56: 1543: 1485: 719:
causes cross-resistance to other antibiotics that act on the ribosomal RNA.
2240: 1914: 1739: 1659: 1641: 1610: 1569: 1512: 1335: 1170: 1119: 1076: 1041: 967: 918: 909: 892: 874: 643: 616: 561: 529: 334: 220: 88: 76: 1698: 1300: 1257: 1213: 1111: 715:
A methylase which alters the ribosomal RNA binding site of the antibiotic
2464: 2399: 2235: 1832: 744: 631: 604: 509: 464:
The reaction converting norepinephrine to epinephrine, catalyzed by PNMT.
428: 370: 297: 252: 175: 171: 112: 52: 1467:
Bauerle, Matthew R.; Schwalm, Erica L.; Booker, Squire J. (2015-02-13).
1449:"Catalysis of methyl group transfers involving tetrahydrofolate and B12" 1068: 1008:"Histone methylation: a dynamic mark in health, disease and inheritance" 680: 488:
SAM donates a methyl group through a radical mechanism in production of
215:, which turns off NF-ÎşB signaling by inhibiting of one of its subunits, 1327: 1313: 310: 306: 202: 194: 167: 84: 684:
biological methyl donors with relevant methyl group highlighted in red
2438: 2412: 2092: 716: 569: 395: 285: 263: 198: 124: 1023: 949: 634:. These substrates contribute to methyl transfer pathways including 2492: 1601: 1584: 705: 596: 585: 489: 362: 305:
N-alpha methyltransferases transfer a methyl group from SAM to the
260: 136: 1784:"Nutrition and Depression: Nutrition, Methylation, and Depression" 1353:. Advances in Botanical Research. Vol. 68. pp. 111–138. 886: 884: 208: 127:
structure and can modulate gene transcription, or even completely
2171: 1831: 755: 720: 330: 318: 314: 267: 163: 2451: 2221: 2001: 1953: 881: 442:
6A is an enzyme that catalyzes chemical reaction as following:
411: 322: 256: 1525: 983:
Chromatin and gene regulation : mechanisms in epigenetics
2425: 423: 419: 415: 212: 726:
Examples of methyltransferase enzymes relevant to disease:
407: 403: 399: 216: 2190: 1226: 552:
Important examples of this enzyme class in humans include
460: 436: 185: 32: 1349:
Ashihara, Hiroshi; Yokota, Takao; Crozier, Alan (2013).
1582: 1055:
Clarke, Paul (May 2007). "Anchoring RCC1 by the tail".
813:
5-Methyltetrahydrofolate-homocysteine methyltransferase
591: 1623: 890: 2481: 1348: 846: 455: 1466: 1270: 166:
protein, is methylated so that it can interact with
779: 1630:Angewandte Chemie International Edition in English 219:. This reduces the transcriptional activation and 847:Katz, J. E.; Dlakic, M; Clarke S (18 July 2003). 712:, causing non-functioning DNA to be synthesized. 649: 147:Methylation of proteins has a regulatory role in 2505: 2025:3-methyl-2-oxobutanoate hydroxymethyltransferase 292: 1351:Biosynthesis and catabolism of purine alkaloids 1005: 756:Applications in drug discovery and development 580:(COMT) degrades a class of molecules known as 382:features of DNA methyltransferases are highly 2206: 1979:Cyclopropane-fatty-acyl-phospholipid synthase 1817: 1383:"PNMT phenylethanolamine N-methyltransferase" 1097: 348: 313:is first cleaved by another enzyme and the X- 235: 1880:Phosphatidylethanolamine N-methyltransferase 1790:"DNA Methylation - What is DNA Methylation?" 1778:"The Role of Methylation in Gene Expression" 1576: 1183: 309:nitrogen on protein targets. The N-terminal 2043:Phosphoribosylglycinamide formyltransferase 1949:Phosphatidyl ethanolamine methyltransferase 333:as it coordinates the localization of some 251:are critical for genetic regulation at the 2213: 2199: 2144:3-hydroxymethylcephem carbamoyltransferase 1824: 1810: 1714:"Hallmarks of Cancer: The Next Generation" 1133:Rana, Ajay K.; Ankri, Serge (2016-01-01). 1006:Greer, Eric L.; Shi, Yang (3 April 2012). 932:Levy, Dan; et al. (5 December 2010). 1759:at the U.S. National Library of Medicine 1729: 1649: 1600: 1559: 1502: 1484: 1160: 1150: 1132: 1031: 957: 908: 864: 679: 675: 572:in the process of histamine metabolism. 483: 459: 296: 239: 39: 31: 1712:D, Hanahan; Ra, Weinberg (2011-03-04). 891:Siedlecki, P; Zielenkiewicz, P (2006). 14: 2506: 2154:N-acetylornithine carbamoyltransferase 1923:Betaine-homocysteine methyltransferase 1870:Phenylethanolamine N-methyltransferase 1767:3-D Structure of DNA Methyltransferase 1054: 980: 554:phenylethanolamine N-methyltransferase 51:are a large group of enzymes that all 2194: 1805: 1672: 1462: 1460: 142: 2108:methylmalonyl-CoA carboxytransferase 1405:"HNMT histamine N-methyltransferase" 1100:Acta Biochimica et Biophysica Sinica 931: 592:Non-SAM dependent methyltransferases 588:, epinephrine, and norepenepherine. 83:-like nucleophilic attack where the 2180:Arginine:glycine amidinotransferase 1900:Acetylserotonin O-methyltransferase 1896:5-hydroxyindole-O-methyltransferase 1711: 1675:"DNA Methylation Errors and Cancer" 1473:The Journal of Biological Chemistry 1427:"COMT catechol-O-methyltransferase" 853:Molecular & Cellular Proteomics 747:deficiency, is caused by a lack of 24: 1750: 1457: 1359:10.1016/B978-0-12-408061-4.00004-3 893:"Mammalian DNA methyltransferases" 751:for the methionine synthase enzyme 456:Natural product methyltransferases 352: 25: 2530: 985:. Malden, MA: Blackwell Science. 2491: 2064:Glutamate formimidoyltransferase 780:Applications in cancer treatment 392:methylated DNA recognition sites 2139:Putrescine carbamoyltransferase 2020:Serine hydroxymethyltransferase 1705: 1666: 1617: 1519: 1441: 1429:. NCBI Genetic Testing Registry 1419: 1407:. NCBI Genetic Testing Registry 1397: 1385:. NCBI Genetic Testing Registry 1375: 1342: 1307: 1264: 1220: 337:proteins in the absence of the 2129:Ornithine carbamoyltransferase 2124:Aspartate carbamoyltransferase 2048:Inosine monophosphate synthase 1928:Homocysteine methyltransferase 1673:Jones, Peter A. (1996-06-01). 1177: 1126: 1091: 1048: 999: 974: 925: 840: 650:Radical SAM methyltransferases 369:(see left). Methylation is an 111:Methylation, as well as other 13: 1: 1905:Catechol-O-methyl transferase 1865:Histamine N-methyltransferase 833: 828:corrinoid-iron sulfur protein 621:methyltetrahydromethanopterin 566:histamine N-methyltransferase 375:DNA methyltransferase enzymes 293:N-terminal methyltransferases 2134:Oxamate carbamoyltransferase 1974:Thiopurine methyltransferase 1796:"Histone Lysine Methylation" 1285:10.1016/0378-1119(88)90299-5 1242:10.1016/0378-1119(88)90298-3 1198:10.1016/0378-1119(90)90486-B 798:Catechol-O-methyltransferase 731:thiopurine methyltransferase 182:and usually cannot survive. 149:protein–protein interactions 29:Group of methylating enzymes 7: 2220: 2149:Lysine carbamoyltransferase 1835:: one carbon transferases ( 788: 388:expression of certain genes 106: 101: 10: 2535: 1731:10.1016/j.cell.2011.02.013 866:10.1074/mcp.M300037-MCP200 512:(alkaloid in chocolate) (R 373:modification catalyzed by 349:DNA/RNA methyltransferases 259:on the ε-nitrogen and the 255:level. They modify mainly 249:Histone methyltransferases 236:Histone methyltransferases 155:, and protein activation. 68:histone methyltransferases 2377: 2369:Michaelis–Menten kinetics 2341: 2310: 2279: 2228: 2166: 2116: 2100: 2081: 2056: 2033: 2010: 1991: 1959:Histone methyltransferase 1941: 1913: 1888: 1875:Amine N-methyltransferase 1857: 1844: 981:Turner, Bryan M. (2001). 808:Histone methyltransferase 568:(HNMT), which methylates 284:is a result of decreased 2261:Diffusion-limited enzyme 2012:Hydroxymethyltransferase 1761:Medical Subject Headings 1152:10.3389/fgene.2016.00099 897:Acta Biochimica Polonica 230: 153:protein–DNA interactions 1486:10.1074/jbc.R114.607044 1316:Natural Product Reports 1012:Nature Reviews Genetics 636:methionine biosynthesis 601:methyl tetrahydrofolate 556:(PNMT), which converts 115:modifications, affects 2069:Aminomethyltransferase 1642:10.1002/anie.201308272 1532:Nucleic Acids Research 910:10.18388/abp.2006_3337 702:tumor-suppressor genes 685: 549: 465: 358: 327:Retinoblastoma protein 302: 245: 123:. It directly impacts 119:, gene stability, and 96:-Adenosyl homocysteine 45: 37: 2354:Eadie–Hofstee diagram 2287:Allosteric regulation 1969:DNA methyltransferase 1792:from News-Medical.net 1544:10.1093/nar/29.5.1097 1452:Vitamins and Hormones 1139:Frontiers in Genetics 803:DNA methyltransferase 762:S-Adenosyl methionine 683: 676:Clinical significance 487: 475:metal-based catalysis 463: 356: 300: 243: 221:inflammatory response 43: 35: 2364:Lineweaver–Burk plot 1964:Thymidylate synthase 477:, and proximity and 379:S-adenosylmethionine 197:pathways, initiates 64:-Adenosyl methionine 1933:Methionine synthase 1786:on Psychology Today 1774:as seen on Flintbox 1112:10.1093/abbs/gmq015 1069:10.1038/ncb0507-485 1057:Nature Cell Biology 823:methionine synthase 818:O-methyltransferase 737:methionine synthase 479:desolvation effects 471:acid-base catalysis 121:parental imprinting 2323:Enzyme superfamily 2256:Enzyme promiscuity 1780:on Nature Scitable 1757:Methyltransferases 1328:10.1039/c2np20029e 793:Examples include: 774:alkylrandomization 698:Fragile X syndrome 686: 578:-methyltransferase 550: 466: 359: 303: 246: 143:Protein regulation 49:Methyltransferases 46: 38: 2479: 2478: 2188: 2187: 2162: 2161: 2077: 2076: 2035:Formyltransferase 1987: 1986: 1685:(11): 2463–2467. 1589:Clin. Infect. Dis 938:Nature Immunology 741:pernicious anemia 659:2-hybridized and 201:, and pauses the 16:(Redirected from 2526: 2496: 2495: 2487: 2359:Hanes–Woolf plot 2302:Enzyme activator 2297:Enzyme inhibitor 2271:Enzyme catalysis 2215: 2208: 2201: 2192: 2191: 2098: 2097: 2008: 2007: 1855: 1854: 1826: 1819: 1812: 1803: 1802: 1744: 1743: 1733: 1709: 1703: 1702: 1670: 1664: 1663: 1653: 1621: 1615: 1614: 1604: 1580: 1574: 1573: 1563: 1538:(5): 1097–1106. 1523: 1517: 1516: 1506: 1488: 1479:(7): 3995–4002. 1464: 1455: 1445: 1439: 1438: 1436: 1434: 1423: 1417: 1416: 1414: 1412: 1401: 1395: 1394: 1392: 1390: 1379: 1373: 1372: 1346: 1340: 1339: 1311: 1305: 1304: 1268: 1262: 1261: 1224: 1218: 1217: 1181: 1175: 1174: 1164: 1154: 1130: 1124: 1123: 1095: 1089: 1088: 1052: 1046: 1045: 1035: 1003: 997: 996: 978: 972: 971: 961: 929: 923: 922: 912: 888: 879: 878: 868: 844: 770:drug development 433:2'-O-methylation 367:5’methylcytosine 339:nuclear envelope 191:tumor suppressor 21: 2534: 2533: 2529: 2528: 2527: 2525: 2524: 2523: 2504: 2503: 2502: 2490: 2482: 2480: 2475: 2387:Oxidoreductases 2373: 2349:Enzyme kinetics 2337: 2333:List of enzymes 2306: 2275: 2246:Catalytic triad 2224: 2219: 2189: 2184: 2158: 2112: 2090: 2073: 2052: 2029: 2000: 1983: 1937: 1909: 1884: 1840: 1830: 1753: 1751:Further reading 1748: 1747: 1710: 1706: 1679:Cancer Research 1671: 1667: 1622: 1618: 1581: 1577: 1524: 1520: 1465: 1458: 1447:Ragsdale, S.W. 1446: 1442: 1432: 1430: 1425: 1424: 1420: 1410: 1408: 1403: 1402: 1398: 1388: 1386: 1381: 1380: 1376: 1369: 1347: 1343: 1322:(10): 1238–50. 1312: 1308: 1269: 1265: 1225: 1221: 1182: 1178: 1131: 1127: 1096: 1092: 1053: 1049: 1024:10.1038/nrg3173 1004: 1000: 993: 979: 975: 950:10.1038/ni.1968 930: 926: 889: 882: 845: 841: 836: 791: 782: 758: 710:DNA translation 678: 668:methylation of 652: 594: 547: 543: 539: 535: 527: 523: 519: 515: 507: 503: 499: 495: 458: 351: 295: 277:non-coding RNAs 238: 233: 193:that activates 162:, an important 145: 135:genes, without 109: 104: 80: 72:natural product 30: 23: 22: 15: 12: 11: 5: 2532: 2522: 2521: 2516: 2501: 2500: 2477: 2476: 2474: 2473: 2460: 2447: 2434: 2421: 2408: 2395: 2381: 2379: 2375: 2374: 2372: 2371: 2366: 2361: 2356: 2351: 2345: 2343: 2339: 2338: 2336: 2335: 2330: 2325: 2320: 2314: 2312: 2311:Classification 2308: 2307: 2305: 2304: 2299: 2294: 2289: 2283: 2281: 2277: 2276: 2274: 2273: 2268: 2263: 2258: 2253: 2248: 2243: 2238: 2232: 2230: 2226: 2225: 2218: 2217: 2210: 2203: 2195: 2186: 2185: 2183: 2182: 2176: 2174: 2164: 2163: 2160: 2159: 2157: 2156: 2151: 2146: 2141: 2136: 2131: 2126: 2120: 2118: 2114: 2113: 2111: 2110: 2104: 2102: 2095: 2079: 2078: 2075: 2074: 2072: 2071: 2066: 2060: 2058: 2054: 2053: 2051: 2050: 2045: 2039: 2037: 2031: 2030: 2028: 2027: 2022: 2016: 2014: 2005: 1989: 1988: 1985: 1984: 1982: 1981: 1976: 1971: 1966: 1961: 1956: 1951: 1945: 1943: 1939: 1938: 1936: 1935: 1930: 1925: 1919: 1917: 1911: 1910: 1908: 1907: 1902: 1892: 1890: 1886: 1885: 1883: 1882: 1877: 1872: 1867: 1861: 1859: 1852: 1842: 1841: 1829: 1828: 1821: 1814: 1806: 1800: 1799: 1793: 1787: 1781: 1775: 1769: 1764: 1752: 1749: 1746: 1745: 1704: 1665: 1636:(15): 3965–9. 1616: 1602:10.1086/650574 1575: 1518: 1456: 1440: 1418: 1396: 1374: 1367: 1341: 1306: 1279:(1): 261–265. 1263: 1236:(1): 253–259. 1219: 1176: 1125: 1090: 1063:(5): 485–487. 1047: 1018:(5): 343–357. 998: 992:978-0865427433 991: 973: 924: 880: 838: 837: 835: 832: 831: 830: 825: 820: 815: 810: 805: 800: 790: 787: 781: 778: 766:drug discovery 757: 754: 753: 752: 734: 677: 674: 651: 648: 640:methanogenesis 613:trimethylamine 593: 590: 584:that includes 558:norepinephrine 545: 541: 537: 533: 525: 521: 517: 513: 505: 501: 497: 493: 457: 454: 350: 347: 294: 291: 273:hydrophobicity 237: 234: 232: 229: 144: 141: 108: 105: 103: 100: 78: 28: 9: 6: 4: 3: 2: 2531: 2520: 2517: 2515: 2512: 2511: 2509: 2499: 2494: 2489: 2488: 2485: 2471: 2467: 2466: 2461: 2458: 2454: 2453: 2448: 2445: 2441: 2440: 2435: 2432: 2428: 2427: 2422: 2419: 2415: 2414: 2409: 2406: 2402: 2401: 2396: 2393: 2389: 2388: 2383: 2382: 2380: 2376: 2370: 2367: 2365: 2362: 2360: 2357: 2355: 2352: 2350: 2347: 2346: 2344: 2340: 2334: 2331: 2329: 2328:Enzyme family 2326: 2324: 2321: 2319: 2316: 2315: 2313: 2309: 2303: 2300: 2298: 2295: 2293: 2292:Cooperativity 2290: 2288: 2285: 2284: 2282: 2278: 2272: 2269: 2267: 2264: 2262: 2259: 2257: 2254: 2252: 2251:Oxyanion hole 2249: 2247: 2244: 2242: 2239: 2237: 2234: 2233: 2231: 2227: 2223: 2216: 2211: 2209: 2204: 2202: 2197: 2196: 2193: 2181: 2178: 2177: 2175: 2173: 2169: 2165: 2155: 2152: 2150: 2147: 2145: 2142: 2140: 2137: 2135: 2132: 2130: 2127: 2125: 2122: 2121: 2119: 2115: 2109: 2106: 2105: 2103: 2099: 2096: 2094: 2088: 2084: 2080: 2070: 2067: 2065: 2062: 2061: 2059: 2055: 2049: 2046: 2044: 2041: 2040: 2038: 2036: 2032: 2026: 2023: 2021: 2018: 2017: 2015: 2013: 2009: 2006: 2004:- and Related 2003: 1998: 1997:Hydroxymethyl 1994: 1990: 1980: 1977: 1975: 1972: 1970: 1967: 1965: 1962: 1960: 1957: 1955: 1952: 1950: 1947: 1946: 1944: 1940: 1934: 1931: 1929: 1926: 1924: 1921: 1920: 1918: 1916: 1912: 1906: 1903: 1901: 1897: 1894: 1893: 1891: 1887: 1881: 1878: 1876: 1873: 1871: 1868: 1866: 1863: 1862: 1860: 1856: 1853: 1851: 1847: 1843: 1838: 1834: 1827: 1822: 1820: 1815: 1813: 1808: 1807: 1804: 1797: 1794: 1791: 1788: 1785: 1782: 1779: 1776: 1773: 1770: 1768: 1765: 1762: 1758: 1755: 1754: 1741: 1737: 1732: 1727: 1724:(5): 646–74. 1723: 1719: 1715: 1708: 1700: 1696: 1692: 1688: 1684: 1680: 1676: 1669: 1661: 1657: 1652: 1647: 1643: 1639: 1635: 1631: 1627: 1620: 1612: 1608: 1603: 1598: 1594: 1590: 1586: 1579: 1571: 1567: 1562: 1557: 1553: 1549: 1545: 1541: 1537: 1533: 1529: 1522: 1514: 1510: 1505: 1500: 1496: 1492: 1487: 1482: 1478: 1474: 1470: 1463: 1461: 1453: 1450: 1444: 1428: 1422: 1406: 1400: 1384: 1378: 1370: 1368:9780124080614 1364: 1360: 1356: 1352: 1345: 1337: 1333: 1329: 1325: 1321: 1317: 1310: 1302: 1298: 1294: 1290: 1286: 1282: 1278: 1274: 1267: 1259: 1255: 1251: 1247: 1243: 1239: 1235: 1231: 1223: 1215: 1211: 1207: 1203: 1199: 1195: 1191: 1187: 1180: 1172: 1168: 1163: 1158: 1153: 1148: 1144: 1140: 1136: 1129: 1121: 1117: 1113: 1109: 1106:(4): 243–52. 1105: 1101: 1094: 1086: 1082: 1078: 1074: 1070: 1066: 1062: 1058: 1051: 1043: 1039: 1034: 1029: 1025: 1021: 1017: 1013: 1009: 1002: 994: 988: 984: 977: 969: 965: 960: 955: 951: 947: 943: 939: 935: 928: 920: 916: 911: 906: 903:(2): 245–56. 902: 898: 894: 887: 885: 876: 872: 867: 862: 859:(8): 525–40. 858: 854: 850: 843: 839: 829: 826: 824: 821: 819: 816: 814: 811: 809: 806: 804: 801: 799: 796: 795: 794: 786: 777: 775: 771: 767: 763: 750: 746: 742: 738: 735: 732: 729: 728: 727: 724: 722: 718: 713: 711: 707: 703: 699: 695: 694:Rett syndrome 691: 682: 673: 671: 666: 662: 658: 647: 645: 641: 637: 633: 630: 626: 625:chloromethane 622: 618: 614: 610: 606: 602: 598: 589: 587: 583: 582:catcholamines 579: 577: 571: 567: 563: 559: 555: 531: 511: 491: 486: 482: 480: 476: 472: 462: 453: 450: 446: 443: 440: 438: 434: 430: 425: 421: 417: 413: 409: 405: 401: 397: 393: 389: 385: 380: 376: 372: 368: 364: 355: 346: 344: 343:spindle poles 340: 336: 332: 328: 324: 320: 316: 312: 308: 299: 290: 287: 283: 282:transcription 278: 274: 269: 265: 262: 258: 254: 250: 242: 228: 224: 222: 218: 214: 210: 206: 204: 200: 196: 192: 187: 183: 181: 180:spindle poles 177: 173: 169: 165: 161: 156: 154: 150: 140: 138: 134: 130: 126: 122: 118: 117:transcription 114: 99: 97: 95: 90: 86: 82: 73: 69: 65: 63: 58: 57:Rossmann fold 54: 50: 42: 34: 27: 19: 2465:Translocases 2462: 2449: 2436: 2423: 2410: 2400:Transferases 2397: 2384: 2241:Binding site 1915:Homocysteine 1849: 1721: 1717: 1707: 1682: 1678: 1668: 1633: 1629: 1619: 1595:(6): 821–5. 1592: 1588: 1578: 1535: 1531: 1521: 1476: 1472: 1451: 1443: 1431:. Retrieved 1421: 1409:. Retrieved 1399: 1387:. Retrieved 1377: 1350: 1344: 1319: 1315: 1309: 1276: 1272: 1266: 1233: 1229: 1222: 1192:(1): 1–240. 1189: 1185: 1179: 1142: 1138: 1128: 1103: 1099: 1093: 1060: 1056: 1050: 1015: 1011: 1001: 982: 976: 944:(1): 29–36. 941: 937: 927: 900: 896: 856: 852: 842: 792: 783: 772:is known as 759: 743:, caused by 725: 714: 687: 669: 664: 660: 656: 653: 644:acetogenesis 617:methanethiol 595: 575: 551: 530:theophylline 467: 451: 447: 444: 441: 360: 304: 247: 225: 207: 184: 157: 146: 110: 93: 89:electrophile 61: 59:for binding 48: 47: 26: 2519:Methylation 2236:Active site 1833:Transferase 1433:18 February 1411:18 February 1389:18 February 745:Vitamin B12 632:vitamin B12 562:epinephrine 510:theobromine 429:epigenetics 264:guanidinium 168:centromeres 2508:Categories 2439:Isomerases 2413:Hydrolases 2280:Regulation 834:References 371:epigenetic 365:, forming 311:methionine 307:N-terminal 253:epigenetic 203:cell cycle 195:DNA repair 158:Examples: 113:epigenetic 85:methionine 2318:EC number 2117:Carbamoyl 2093:Carbamoyl 1691:0008-5472 1552:1362-4962 1495:0021-9258 1293:0378-1119 1250:0378-1119 1206:0378-1119 717:linezolid 574:Catechol- 570:histamine 396:RNA world 384:conserved 286:chromatin 199:apoptosis 125:chromatin 53:methylate 18:Methylase 2514:EC 2.1.1 2342:Kinetics 2266:Cofactor 2229:Activity 1740:21376230 1660:24616228 1611:20144045 1570:11222759 1513:25477520 1336:22850796 1171:27375676 1120:20383462 1077:17473856 1042:22473383 968:21131967 919:16582985 875:12872006 789:Examples 749:cofactor 706:cytosine 629:cofactor 597:Methanol 586:dopamine 490:caffeine 363:cytosine 261:arginine 137:mutation 133:activate 107:Genetics 102:Function 2498:Biology 2452:Ligases 2222:Enzymes 2172:Amidine 2101:Carboxy 2087:Carboxy 1850:Methyl- 1699:8653676 1651:4076696 1504:4326810 1454:, 2008. 1301:3248729 1258:3248728 1214:2172084 1162:4893491 1033:4073795 959:3074206 721:Plasmid 335:nuclear 331:mitosis 319:Alanine 315:Proline 268:histone 164:mitotic 129:silence 2484:Portal 2426:Lyases 2002:Formyl 1954:DNMT3B 1763:(MeSH) 1738:  1697:  1689:  1658:  1648:  1609:  1568:  1558:  1550:  1511:  1501:  1493:  1365:  1334:  1299:  1291:  1256:  1248:  1212:  1204:  1169:  1159:  1145:: 99. 1118:  1085:711645 1083:  1075:  1040:  1030:  989:  966:  956:  917:  873:  696:, and 642:, and 623:, and 611:, and 564:, and 528:) and 516:= H, R 412:snoRNA 323:Serine 257:lysine 2378:Types 2168:2.1.4 2083:2.1.3 2057:Other 1993:2.1.2 1942:Other 1846:2.1.1 1561:29726 1081:S2CID 605:mono- 548:= H). 424:tmRNA 420:miRNA 416:snRNA 231:Types 213:SETD6 209:NF-ÎşB 2470:list 2463:EC7 2457:list 2450:EC6 2444:list 2437:EC5 2431:list 2424:EC4 2418:list 2411:EC3 2405:list 2398:EC2 2392:list 2385:EC1 2091:and 1839:2.1) 1736:PMID 1718:Cell 1695:PMID 1687:ISSN 1656:PMID 1607:PMID 1566:PMID 1548:ISSN 1509:PMID 1491:ISSN 1435:2014 1413:2014 1391:2014 1363:ISBN 1332:PMID 1297:PMID 1289:ISSN 1273:Gene 1254:PMID 1246:ISSN 1230:Gene 1210:PMID 1202:ISSN 1186:Gene 1167:PMID 1116:PMID 1073:PMID 1038:PMID 987:ISBN 964:PMID 915:PMID 871:PMID 768:and 540:= CH 524:= CH 504:= CH 408:tRNA 404:rRNA 400:mRNA 217:RelA 174:and 160:RCC1 1726:doi 1722:144 1646:PMC 1638:doi 1597:doi 1556:PMC 1540:doi 1499:PMC 1481:doi 1477:290 1355:doi 1324:doi 1281:doi 1238:doi 1194:doi 1157:PMC 1147:doi 1108:doi 1065:doi 1028:PMC 1020:doi 954:PMC 946:doi 905:doi 861:doi 690:ICF 609:di- 560:to 544:, R 536:= R 520:= R 508:), 500:= R 496:= R 437:m6A 186:p53 176:H2B 172:H2A 131:or 2510:: 2170:: 2085:: 1999:-, 1995:: 1889:O- 1858:N- 1848:: 1837:EC 1734:. 1720:. 1716:. 1693:. 1683:56 1681:. 1677:. 1654:. 1644:. 1634:53 1632:. 1628:. 1605:. 1593:50 1591:. 1587:. 1564:. 1554:. 1546:. 1536:29 1534:. 1530:. 1507:. 1497:. 1489:. 1475:. 1471:. 1459:^ 1361:. 1330:. 1320:29 1318:. 1295:. 1287:. 1277:74 1275:. 1252:. 1244:. 1234:74 1232:. 1208:. 1200:. 1190:92 1188:. 1165:. 1155:. 1141:. 1137:. 1114:. 1104:42 1102:. 1079:. 1071:. 1059:. 1036:. 1026:. 1016:13 1014:. 1010:. 962:. 952:. 942:12 940:. 936:. 913:. 901:53 899:. 895:. 883:^ 869:. 855:. 851:. 776:. 739:: 692:, 670:sp 665:sp 661:sp 657:sp 646:. 638:, 619:, 615:, 607:, 603:, 599:, 532:(R 492:(R 473:, 435:, 431:. 422:, 418:, 414:, 410:, 406:, 402:, 321:, 151:, 2486:: 2472:) 2468:( 2459:) 2455:( 2446:) 2442:( 2433:) 2429:( 2420:) 2416:( 2407:) 2403:( 2394:) 2390:( 2214:e 2207:t 2200:v 2089:- 1898:/ 1825:e 1818:t 1811:v 1742:. 1728:: 1701:. 1662:. 1640:: 1613:. 1599:: 1572:. 1542:: 1515:. 1483:: 1437:. 1415:. 1393:. 1371:. 1357:: 1338:. 1326:: 1303:. 1283:: 1260:. 1240:: 1216:. 1196:: 1173:. 1149:: 1143:7 1122:. 1110:: 1087:. 1067:: 1061:9 1044:. 1022:: 995:. 970:. 948:: 921:. 907:: 877:. 863:: 857:2 576:O 546:3 542:3 538:2 534:1 526:3 522:3 518:2 514:1 506:3 502:3 498:2 494:1 94:S 81:2 79:N 77:S 62:S 20:)

Index

Methylase


methylate
Rossmann fold
S-Adenosyl methionine
histone methyltransferases
natural product
SN2
methionine
electrophile
S-Adenosyl homocysteine
epigenetic
transcription
parental imprinting
chromatin
silence
activate
mutation
protein–protein interactions
protein–DNA interactions
RCC1
mitotic
centromeres
H2A
H2B
spindle poles
p53
tumor suppressor
DNA repair

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.

↑