444:
Keith G. Weinstock; Joseph M. Merrick; Anna Glodek; John L. Scott; Neil S. M. Geoghagen; Janice F. Weidman; Joyce L. Fuhrmann; Dave Nguyen; Teresa R. Utterback; Jenny M. Kelley; Jeremy D. Peterson; Paul W. Sadow; Michael C. Hanna; Matthew D. Cotton; Kevin M. Roberts; Margaret A. Hurst; Brian P. Kaine; Mark
Borodovsky; Hans-Peter Klenk; Claire M. Fraser; Hamilton O. Smith; Carl R. Woese;
443:
Carol J. Bult; Owen White; Gary J. Olsen; Lixin Zhou; Robert D. Fleischmann; Granger G. Sutton; Judith A. Blake; Lisa M. FitzGerald; Rebecca A. Clayton; Jeannine D. Gocayne; Anthony R. Kerlavage; Brian A. Dougherty; Jean-Francois Tomb; Mark D. Adams; Claudia I. Reich; Ross
Overbeek; Ewen F. Kirkness;
684:
Bult, Carol J.; White, Owen; Olsen, Gary J.; Zhou, Lixin; Fleischmann, Robert D.; Sutton, Granger G.; Blake, Judith A.; FitzGerald, Lisa M.; Clayton, Rebecca A.; Gocayne, Jeannine D.; Kerlavage, Anthony R.; Dougherty, Brian A.; Tomb, Jean-Francois; Adams, Mark D.; Reich, Claudia I. (1996-08-23).
274:
was sequenced using whole-genome random sequencing, several interesting characteristics were determined. Methanocaldococcus has a large circular chromosome that is 1.66 mega base pairs long with a G+C content of 31.4%. The species also has a large circular extra-chromosome and small circular
1281:
767:
Rudolf K. Thauer; Anne-Kristin Kaster; Meike
Goenrich; Michael Schick; Takeshi Hiromoto; Seigo Shima (2010). "Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H
1240:
Lee, Eun Hye; Lee, Kitaik; Hwang, Kwang Yeon (13 December 2013). "Structural characterization and comparison of the large subunits of IPM isomerase and homoaconitase from
266:
represented the first member of the
Archaea to have its genome sequenced. According to Venter, the unique features of the genome provided strong evidence that there are
849:
Ilka Haase; Simone Mörtl; Peter Köhler; Adelbert Bacher; Markus
Fischer (2003). "Biosynthesis of riboflavin in Archaea: 6,7-dimethyl-8-ribityllumazine synthase of
1462:
510:
231:" chimney which revealed evidence of Methanocaldococcus jannaschii living in this extreme habitat of temperatures from 48 - 46 °C. Like many kinds of
379:, and novel amino acid synthesis pathways. Many information processing pathways have also been studied in this organism, such as an archaeal-specific
343:
1436:
666:
1475:
1039:
Maus, Deborah; Heinz, Jacob; Schirmack, Janosch; Airo, Alessandro; Kounaves, Samuel P.; Wagner, Dirk; Schulze-Makuch, Dirk (2020-01-08).
724:
Erica J. Lyon; Seigo Shima; Gerrit
Buurman; Shantanu Chowdhuri; Alfred Batschauer; Klaus Steinbach; Rudolf K. Thauer (January 2004).
419:
has focused on seeing if these enzymes, which are typically optimal at high temperatures, can be just as active in low temperatures.
1423:
1449:
1375:
1282:
New
Possibilities for Life in the Strange, Dark World at the Bottom of Earth's Ocean – And Perhaps in Oceans on Other Planets
531:
1454:
220:
1534:
384:
1195:"Identification of a unique radical S-adenosylmethionine methylase likely involved in methanopterin biosynthesis in
1501:
855:
730:
808:
Wenhong Zhu; Claudia I. Reich; Gary J. Olsen; Carol S. Giometti; John R. Yates III (2004). "Shotgun proteomics of
1480:
427:
is an extremophile several astrobiology research projects have begun looking into methane producing bacteria.
204:. The sequencing identified many genes unique to the archaea. Many of the synthesis pathways for methanogenic
773:
208:
were worked out biochemically in this organism, as were several other archaeal-specific metabolic pathways.
814:
407:, several research interests have developed. One area of interest is the hyperthermophilic enzymes that
299:
1506:
1274:
The
Release of Energy During Protein Synthesis at Ultramafic-Hosted Submarine Hydrothermal Ecosystems
351:
330:
251:
1294:
1273:
564:
1318:
896:
205:
1276:. In: AGU Journal of Geophysical Research: Biogeosciences, Volume 126, Issue 11, e2021JG006436.
1101:"Crystallization and preliminary X-ray diffraction analysis of MJ0458, an adenylate kinase from
1529:
1441:
1337:
766:
347:
227:, at a depth of 2600 m, near the western coast of Mexico. Surface material was collected at a "
726:"UV-A/blue-light inactivation of the 'metal-free' hydrogenase (Hmd) from methanogenic archaea"
1467:
138:
102:
686:
1493:
1410:
1041:"Methanogenic Archaea Can Produce Methane in Deliquescence-Driven Mars Analog Environments"
463:
1302:
786:
8:
807:
412:
392:
239:
possess the ability to adapt to high temperatures, high pressure, and moderate salinity.
943:"Hyperthermophilic Enzymes: Sources, Uses, and Molecular Mechanisms for Thermostability"
889:
723:
467:
1223:
1194:
1176:
1147:
1129:
1100:
1073:
1040:
639:
600:
581:
487:
288:
259:
157:
115:
31:
1310:
918:
891:
523:
1488:
1397:
1261:
1228:
1181:
1134:
1078:
1060:
1021:
1016:
999:
980:
975:
962:
942:
923:
872:
868:
831:
790:
749:
744:
725:
706:
644:
626:
537:
527:
479:
454:
224:
201:
909:
585:
562:
sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent".
491:
1402:
1277:
1253:
1218:
1210:
1171:
1163:
1124:
1116:
1068:
1052:
1011:
970:
954:
913:
905:
864:
823:
782:
739:
698:
634:
616:
573:
519:
471:
267:
702:
475:
848:
687:"Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii"
90:
958:
1360:
1056:
380:
321:
317:
1257:
1120:
442:
1523:
1064:
1025:
1000:"Genetics of Methanococcus: possibilities for functional genomics in Archaea"
966:
710:
630:
294:
200:. It was the first archaeon, and third organism, to have its complete genome
66:
54:
1265:
1232:
1185:
1138:
1082:
984:
876:
835:
794:
753:
648:
541:
445:
255:
232:
228:
197:
78:
927:
621:
483:
1369:
557:
416:
339:
298:) and is therefore sometimes referred to as a "class I" methanogen (e.g.
187:
1214:
1167:
1428:
890:
Yoshizumi Ishino; Kayoko Komori; Isaac K. O. Cann; Yosuke Koga (1998).
577:
404:
376:
375:, including the pathways for synthesis of many methanogenic cofactors,
313:
190:
1389:
827:
558:
W. J. Jones; J. A. Leigh; F. Mayer; C. R. Woese; R. S. Wolfe (1983). "
508:
Robert H. White (2001). "Biosynthesis of the methanogenic cofactors".
357:
1331:
1284:
on SciTechDaily. November 28, 2021. Source: Arizona State
University
1354:
411:
produces in hopes of understanding enzyme evolution or even enzyme
328:
as primary energy sources, unlike many other methanococci (such as
325:
1384:
365:
335:
193:
42:
448:(1996). "Complete genome sequence of the methanogenic archaeon,
1415:
1193:
Allen, Kyle D.; Xu, Huimin; White, Robert H. (September 2014).
599:
Tsoka, Sophia; Simon, David; Ouzounis, Christos A. (2004).
423:
has been a model system for in vivo genetic studies. Since
1146:
Wang, Yu; Xu, Huimin; White, Robert H. (August 2014).
1038:
403:
Due to the amount of information that was gained from
371:
Many novel metabolic pathways have been worked out in
338:
as a primary energy source. The genome includes many
998:
Tumbula, Debra L.; Whitman, William B. (July 1999).
219:was isolated from a submarine hydrothermal vent at
941:Vieille, Claire; Zeikus, Gregory J. (March 2001).
683:
598:
1521:
892:"A novel DNA polymerase family found in Archaea"
344:5,10-methenyltetrahydromethanopterin hydrogenase
507:
1280:. First published: 30 October 2021. See also:
997:
940:
664:
1192:
1239:
1145:
304:
223:. The hydrothermal vent was located in the
947:Microbiology and Molecular Biology Reviews
1222:
1175:
1128:
1072:
1015:
974:
917:
743:
667:"Deep sea yields a clue to life's origin"
638:
620:
398:
1327:- the Bacterial Diversity Metadatabase
601:"Automated metabolic reconstruction for
553:
551:
503:
501:
318:making methane as a metabolic byproduct
1522:
660:
658:
1336:
1335:
787:10.1146/annurev.biochem.030508.152103
548:
498:
221:Woods Hole Oceanographic Institution
1272:Jeffrey M. Dick, Everett L. Shock:
1098:
812:and insights into methanogenesis".
655:
368:: 19 were discovered by one study.
13:
1092:
385:single-pass transmembrane proteins
320:. It is only capable of growth on
14:
1546:
1288:
1156:American Society for Microbiology
1246:Acta Crystallographica Section D
1109:Acta Crystallographica Section F
1099:Gao, Yongxiang (November 2013).
1017:10.1046/j.1365-2958.1999.01463.x
869:10.1046/j.1432-1033.2003.03478.x
856:European Journal of Biochemistry
745:10.1046/j.1432-1033.2003.03920.x
731:European Journal of Biochemistry
665:Nicholas Wade (23 August 1996).
1297:Methano(caldo)coccus jannaschii
1032:
991:
934:
910:10.1128/JB.180.8.2232-2236.1998
883:
842:
1303:UCSD genome browser entry for
1148:"Beta-alanine biosynthesis in
801:
760:
717:
677:
592:
436:
1:
1468:methanocaldococcus-jannaschii
1376:Methanocaldococcus jannaschii
1346:Methanocaldococcus jannaschii
1321:Methanocaldococcus jannaschii
1313:Methanocaldococcus jannaschii
1305:Methanocaldococcus jannaschii
1197:Methanocaldococcus jannaschii
1150:Methanocaldococcus jannaschii
1103:Methanocaldococcus jannaschii
774:Annual Review of Biochemistry
703:10.1126/science.273.5278.1058
524:10.1016/s0083-6729(01)61010-0
476:10.1126/science.273.5278.1058
430:
310:Methanocaldococcus jannaschii
248:Methanocaldococcus jannaschii
242:
217:Methanocaldococcus jannaschii
179:Methanocaldococcus jannaschii
148:Methanocaldococcus jannaschii
25:Methanocaldococcus jannaschii
815:Journal of Proteome Research
250:was sequenced by a group at
7:
959:10.1128/mmbr.65.1.1-43.2001
364:contains a large number of
284:Methanocaldoccus jannaschii
278:
10:
1551:
1057:10.1038/s41598-019-56267-4
383:family. Information about
211:
1535:Archaea described in 1983
1344:
1258:10.1107/S1399004713033762
1121:10.1107/S1744309113026638
352:coenzyme F420 hydrogenase
331:Methanococcus maripaludis
286:is a member of the genus
163:
156:
144:
137:
32:Scientific classification
30:
23:
1278:doi:10.1029/2021JG006436
1242:Methanococcus jannaschii
851:Methanococcus jannaschii
810:Methanococcus jannaschii
603:Methanococcus jannaschii
565:Archives of Microbiology
560:Methanococcus jannaschii
450:Methanococcus jannaschii
409:Methanococcus jannaschii
305:Biology and biochemistry
184:Methanococcus jannaschii
167:Methanococcus jannaschii
1295:Microbe wiki entry for
1203:Journal of Bacteriology
897:Journal of Bacteriology
1004:Molecular Microbiology
399:Relevance and Research
348:ferredoxin hydrogenase
316:, meaning it grows by
292:(previously a part of
511:Vitamins and Hormones
334:) which can also use
268:three domains of life
103:Methanocaldococcaceae
413:catalytic mechanisms
360:studies showed that
1215:10.1128/JB.01903-14
1168:10.1128/JB.01784-14
697:(5278): 1058–1073.
622:10.1155/2004/324925
468:1996Sci...273.1058B
462:(5278): 1058–1073.
393:Membranome database
258:using whole-genome
16:Species of archaeon
1045:Scientific Reports
578:10.1007/BF00425213
312:is a thermophilic
289:Methanocaldococcus
275:extra-chromosome.
260:shotgun sequencing
130:M. jannaschii
116:Methanocaldococcus
1517:
1516:
1489:Open Tree of Life
1338:Taxon identifiers
1209:(18): 3315–3323.
1162:(15): 2869–2875.
1115:(11): 1272–1274.
828:10.1021/pr034109s
533:978-0-12-709861-6
225:East Pacific Rise
175:
174:
1542:
1510:
1509:
1497:
1496:
1484:
1483:
1471:
1470:
1458:
1457:
1445:
1444:
1432:
1431:
1419:
1418:
1406:
1405:
1393:
1392:
1380:
1379:
1378:
1365:
1364:
1363:
1333:
1332:
1269:
1236:
1226:
1189:
1179:
1142:
1132:
1087:
1086:
1076:
1036:
1030:
1029:
1019:
995:
989:
988:
978:
938:
932:
931:
921:
904:(8): 2232–2236.
887:
881:
880:
863:(5): 1025–1032.
846:
840:
839:
805:
799:
798:
764:
758:
757:
747:
721:
715:
714:
681:
675:
674:
662:
653:
652:
642:
624:
596:
590:
589:
555:
546:
545:
505:
496:
495:
440:
391:was compiled in
150:
21:
20:
1550:
1549:
1545:
1544:
1543:
1541:
1540:
1539:
1520:
1519:
1518:
1513:
1505:
1500:
1492:
1487:
1479:
1474:
1466:
1461:
1453:
1448:
1440:
1435:
1427:
1422:
1414:
1409:
1401:
1396:
1388:
1383:
1374:
1373:
1368:
1359:
1358:
1353:
1340:
1319:Type strain of
1311:KEGG entry for
1291:
1095:
1093:Further reading
1090:
1037:
1033:
996:
992:
939:
935:
888:
884:
847:
843:
806:
802:
770:
765:
761:
722:
718:
682:
678:
663:
656:
597:
593:
556:
549:
534:
506:
499:
446:J. Craig Venter
441:
437:
433:
401:
307:
281:
245:
214:
152:
146:
133:
119:
105:
93:
91:Methanococcales
81:
69:
57:
45:
17:
12:
11:
5:
1548:
1538:
1537:
1532:
1515:
1514:
1512:
1511:
1498:
1485:
1472:
1459:
1446:
1433:
1420:
1407:
1394:
1381:
1366:
1350:
1348:
1342:
1341:
1330:
1329:
1316:
1308:
1300:
1290:
1289:External links
1287:
1286:
1285:
1270:
1252:(4): 922–931.
1237:
1190:
1143:
1094:
1091:
1089:
1088:
1031:
990:
933:
882:
841:
822:(3): 538–548.
800:
768:
759:
738:(1): 195–204.
716:
676:
671:New York Times
654:
615:(4): 223–229.
591:
572:(4): 254–261.
547:
532:
497:
434:
432:
429:
415:. Research on
400:
397:
381:DNA polymerase
322:carbon dioxide
306:
303:
280:
277:
244:
241:
213:
210:
173:
172:
171:
170:
161:
160:
154:
153:
142:
141:
135:
134:
127:
125:
121:
120:
113:
111:
107:
106:
101:
99:
95:
94:
89:
87:
83:
82:
77:
75:
71:
70:
65:
63:
59:
58:
53:
51:
47:
46:
41:
39:
35:
34:
28:
27:
15:
9:
6:
4:
3:
2:
1547:
1536:
1533:
1531:
1530:Euryarchaeota
1528:
1527:
1525:
1508:
1503:
1499:
1495:
1490:
1486:
1482:
1477:
1473:
1469:
1464:
1460:
1456:
1451:
1447:
1443:
1438:
1434:
1430:
1425:
1421:
1417:
1412:
1408:
1404:
1399:
1395:
1391:
1386:
1382:
1377:
1371:
1367:
1362:
1356:
1352:
1351:
1349:
1347:
1343:
1339:
1334:
1328:
1326:
1322:
1317:
1315:
1314:
1309:
1307:
1306:
1301:
1299:
1298:
1293:
1292:
1283:
1279:
1275:
1271:
1267:
1263:
1259:
1255:
1251:
1247:
1243:
1238:
1234:
1230:
1225:
1220:
1216:
1212:
1208:
1204:
1200:
1198:
1191:
1187:
1183:
1178:
1173:
1169:
1165:
1161:
1157:
1153:
1151:
1144:
1140:
1136:
1131:
1126:
1122:
1118:
1114:
1110:
1106:
1104:
1097:
1096:
1084:
1080:
1075:
1070:
1066:
1062:
1058:
1054:
1050:
1046:
1042:
1035:
1027:
1023:
1018:
1013:
1009:
1005:
1001:
994:
986:
982:
977:
972:
968:
964:
960:
956:
952:
948:
944:
937:
929:
925:
920:
915:
911:
907:
903:
899:
898:
893:
886:
878:
874:
870:
866:
862:
858:
857:
852:
845:
837:
833:
829:
825:
821:
817:
816:
811:
804:
796:
792:
788:
784:
780:
776:
775:
763:
755:
751:
746:
741:
737:
733:
732:
727:
720:
712:
708:
704:
700:
696:
692:
688:
680:
672:
668:
661:
659:
650:
646:
641:
636:
632:
628:
623:
618:
614:
610:
606:
604:
595:
587:
583:
579:
575:
571:
567:
566:
561:
554:
552:
543:
539:
535:
529:
525:
521:
517:
513:
512:
504:
502:
493:
489:
485:
481:
477:
473:
469:
465:
461:
457:
456:
451:
447:
439:
435:
428:
426:
425:M. jannaschii
422:
421:M. jannaschii
418:
414:
410:
406:
396:
394:
390:
389:M. jannaschii
386:
382:
378:
374:
373:M. jannaschii
369:
367:
363:
362:M. jannaschii
359:
355:
353:
350:(eha), and a
349:
345:
341:
337:
333:
332:
327:
323:
319:
315:
311:
302:
300:
297:
296:
295:Methanococcus
291:
290:
285:
276:
273:
272:M. jannaschii
269:
265:
264:M. jannaschii
261:
257:
253:
249:
240:
238:
237:M. jannaschii
234:
233:extremophiles
230:
226:
222:
218:
209:
207:
203:
199:
196:in the class
195:
192:
189:
185:
181:
180:
168:
165:
164:
162:
159:
155:
151:
149:
143:
140:
139:Binomial name
136:
132:
131:
126:
123:
122:
118:
117:
112:
109:
108:
104:
100:
97:
96:
92:
88:
85:
84:
80:
76:
73:
72:
68:
67:Euryarchaeota
64:
61:
60:
56:
55:Euryarchaeota
52:
49:
48:
44:
40:
37:
36:
33:
29:
26:
22:
19:
1345:
1324:
1320:
1312:
1304:
1296:
1249:
1245:
1241:
1206:
1202:
1196:
1159:
1155:
1149:
1112:
1108:
1102:
1048:
1044:
1034:
1007:
1003:
993:
950:
946:
936:
901:
895:
885:
860:
854:
850:
844:
819:
813:
809:
803:
778:
772:
762:
735:
729:
719:
694:
690:
679:
670:
612:
608:
602:
594:
569:
563:
559:
515:
509:
459:
453:
449:
438:
424:
420:
408:
402:
388:
372:
370:
361:
356:
342:, such as a
340:hydrogenases
329:
309:
308:
293:
287:
283:
282:
271:
263:
256:Craig Venter
247:
246:
236:
229:white smoker
216:
215:
198:Methanococci
191:methanogenic
188:thermophilic
183:
178:
177:
176:
169:(Jones 1983)
166:
147:
145:
129:
128:
114:
79:Methanococci
24:
18:
1370:Wikispecies
953:(1): 1–43.
781:: 507–536.
518:: 299–337.
417:mutagenesis
1524:Categories
1010:(1): 1–7.
771:storage".
431:References
405:sequencing
377:riboflavin
314:methanogen
243:Sequencing
182:(formerly
1065:2045-2322
1026:0950-382X
967:1092-2172
711:0036-8075
631:1472-3646
358:Proteomic
206:cofactors
202:sequenced
124:Species:
50:Kingdom:
1442:10546724
1361:Q6823580
1355:Wikidata
1266:24699638
1233:25002541
1186:24891443
1139:24192367
1083:31913316
1051:(1): 6.
985:11238984
877:12603336
836:15253435
795:20235826
754:14686932
649:15810431
586:33277659
542:11153270
492:41481616
326:hydrogen
279:Taxonomy
270:. After
194:archaean
158:Synonyms
98:Family:
62:Phylum:
38:Domain:
1429:1000159
1385:BacDive
1224:4135684
1177:4135672
1130:3818051
1074:6949245
928:9555910
691:Science
640:2685575
609:Archaea
484:8688087
464:Bibcode
455:Science
366:inteins
336:formate
254:led by
212:History
186:) is a
110:Genus:
86:Order:
74:Class:
43:Archaea
1507:573641
1455:951786
1416:973345
1323:at Bac
1264:
1231:
1221:
1184:
1174:
1137:
1127:
1081:
1071:
1063:
1024:
983:
973:
965:
926:
919:107154
916:
875:
834:
793:
752:
709:
647:
637:
629:
584:
540:
530:
490:
482:
1502:WoRMS
1494:44033
1437:IRMNG
1403:42FCJ
976:99017
582:S2CID
488:S2CID
387:from
1481:2190
1476:NCBI
1463:LPSN
1450:ITIS
1424:GBIF
1390:6981
1325:Dive
1262:PMID
1229:PMID
1182:PMID
1135:PMID
1079:PMID
1061:ISSN
1022:ISSN
981:PMID
963:ISSN
924:PMID
873:PMID
832:PMID
791:PMID
750:PMID
707:ISSN
645:PMID
627:ISSN
538:PMID
528:ISBN
480:PMID
346:, a
324:and
252:TIGR
1411:EoL
1398:CoL
1254:doi
1244:".
1219:PMC
1211:doi
1207:196
1172:PMC
1164:doi
1160:196
1125:PMC
1117:doi
1069:PMC
1053:doi
1012:doi
971:PMC
955:doi
914:PMC
906:doi
902:180
865:doi
861:270
853:".
824:doi
783:doi
740:doi
736:271
699:doi
695:273
635:PMC
617:doi
574:doi
570:136
520:doi
472:doi
460:273
452:".
301:).
1526::
1504::
1491::
1478::
1465::
1452::
1439::
1426::
1413::
1400::
1387::
1372::
1357::
1260:.
1250:70
1248:.
1227:.
1217:.
1205:.
1201:.
1180:.
1170:.
1158:.
1154:.
1133:.
1123:.
1113:69
1111:.
1107:.
1077:.
1067:.
1059:.
1049:10
1047:.
1043:.
1020:.
1008:33
1006:.
1002:.
979:.
969:.
961:.
951:65
949:.
945:.
922:.
912:.
900:.
894:.
871:.
859:.
830:.
818:.
789:.
779:79
777:.
748:.
734:.
728:.
705:.
693:.
689:.
669:.
657:^
643:.
633:.
625:.
611:.
607:.
580:.
568:.
550:^
536:.
526:.
516:61
514:.
500:^
486:.
478:.
470:.
458:.
395:.
354:.
262:.
235:,
1268:.
1256::
1235:.
1213::
1199:"
1188:.
1166::
1152:"
1141:.
1119::
1105:"
1085:.
1055::
1028:.
1014::
987:.
957::
930:.
908::
879:.
867::
838:.
826::
820:3
797:.
785::
769:2
756:.
742::
713:.
701::
673:.
651:.
619::
613:1
605:"
588:.
576::
544:.
522::
494:.
474::
466::
Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.