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TreeBASE

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The purpose of the TreeBASE project was to provide stable records and identifiers for these data, so that other workers can refer to their deposited data in their publication, and other scientists can locate the data and use them to verify the original research or to include or extend them in further
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Sanderson, M. J.; M. J. Donoghue; W. Piel; T. Eriksson (1994). "TreeBASE: a prototype database of phylogenetic analyses and an interactive tool for browsing the phylogeny of life".
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In 2022, TreeBASE was taken offline due to security issues which were unable to be fixed with project resources; the future of the database is uncertain.
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To the Interoperable "Catalog of Life" with Partners Species 2000 Asia Oceanea. Research Report from the National Institute for Environmental Studies
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Piel, W. H.; M. J. Donoghue; M. J. Sanderson (2002). "TreeBASE: a database of phylogenetic knowledge".
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that are inferred to best describe the evolutionary relationships between the taxa.
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Starting in Winter 2010, TreeBASE was reorganized and became associated with the
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Vos, Rutger A.; Hilmar Lapp; William H. Piel; Val Tannen (2010).
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The project was started in 1994, with funding from the US
168: 80:(NESCent), which hosted the database and web server. 339: 169:"CyberInfrastructure for Phylogenetic Research" 322: 329: 315: 223: 340: 240:"Phyloinformatics Research Foundation" 78:National Evolutionary Synthesis Center 59: 281: 85:Phyloinformatics Research Foundation 348:Bibliographic databases and indexes 13: 14: 369: 212:"TreeBASE2: Rise of the Machines" 285: 261:"Thoughts on TreeBASE dying(?)" 253: 232: 203: 182: 161: 146: 119: 98: 1: 92: 301:. You can help Knowledge by 33:multiple sequence alignments 7: 72:web service interface with 66:National Science Foundation 10: 374: 280: 128:American Journal of Botany 50: 43:about these taxa, and the 29:character state matrices 76:search facilities, and 297:-related article is a 225:10.1038/npre.2010.4600 190:"processing PhylOData" 19:was a repository of 353:Academic publishing 60:History and funding 35:) made on a set of 25:scientific journals 45:phylogenetic trees 23:data published in 310: 309: 216:Nature Precedings 365: 331: 324: 317: 289: 282: 273: 272: 270: 268: 257: 251: 250: 248: 246: 236: 230: 229: 227: 207: 201: 200: 198: 196: 186: 180: 179: 177: 175: 165: 159: 158: 150: 144: 143: 123: 117: 116: 114: 112: 102: 373: 372: 368: 367: 366: 364: 363: 362: 338: 337: 336: 335: 278: 276: 266: 264: 259: 258: 254: 244: 242: 238: 237: 233: 208: 204: 194: 192: 188: 187: 183: 173: 171: 167: 166: 162: 151: 147: 124: 120: 110: 108: 104: 103: 99: 95: 62: 53: 12: 11: 5: 371: 361: 360: 358:Database stubs 355: 350: 334: 333: 326: 319: 311: 308: 307: 290: 275: 274: 252: 231: 202: 181: 160: 145: 118: 96: 94: 91: 61: 58: 52: 49: 9: 6: 4: 3: 2: 370: 359: 356: 354: 351: 349: 346: 345: 343: 332: 327: 325: 320: 318: 313: 312: 306: 304: 300: 296: 291: 288: 284: 283: 279: 263:. 11 May 2022 262: 256: 241: 235: 226: 221: 217: 213: 206: 191: 185: 170: 164: 157:(171): 41–47. 156: 149: 141: 137: 133: 129: 122: 107: 101: 97: 90: 87: 86: 81: 79: 75: 71: 67: 57: 48: 46: 42: 38: 34: 30: 26: 22: 18: 303:expanding it 292: 277: 265:. Retrieved 255: 243:. Retrieved 234: 215: 205: 193:. Retrieved 184: 172:. Retrieved 163: 154: 148: 131: 127: 121: 109:. Retrieved 100: 88: 82: 63: 54: 21:phylogenetic 16: 15: 342:Categories 134:(6): 183. 106:"TreeBASE" 93:References 56:analyses. 295:database 41:metadata 17:TreeBASE 245:5 April 195:5 April 174:5 April 140:2445447 111:5 April 70:RESTful 51:Mission 267:16 May 138:  293:This 136:JSTOR 299:stub 269:2022 247:2011 197:2011 176:2011 113:2011 37:taxa 220:doi 74:CQL 31:or 344:: 218:. 214:. 132:81 130:. 39:, 330:e 323:t 316:v 305:. 271:. 249:. 228:. 222:: 199:. 178:. 142:. 115:.

Index

phylogenetic
scientific journals
character state matrices
multiple sequence alignments
taxa
metadata
phylogenetic trees
National Science Foundation
RESTful
CQL
National Evolutionary Synthesis Center
Phyloinformatics Research Foundation
"TreeBASE"
JSTOR
2445447
"CyberInfrastructure for Phylogenetic Research"
"processing PhylOData"
"TreeBASE2: Rise of the Machines"
doi
10.1038/npre.2010.4600
"Phyloinformatics Research Foundation"
"Thoughts on TreeBASE dying(?)"
Stub icon
database
stub
expanding it
v
t
e
Categories

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