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Bacteriocin

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187: 789: 868:, and coliphage HSA virus; each of enterocin AAR-71 class IIa, enterocin AAR-74 class IIa, and erwiniocin NA4 against coliphage HSA virus; each of enterocin ST5Ha, enterocin NKR-5-3C, and subtilosin against HSV-1; each of enterocin ST4V and enterocin CRL35 class IIa against HSV-1 and HSV-2; labyrinthopeptin A1 against HIV-1 and HSV-1; and bacteriocin from 439:
taxa and almost never kill the majority of the taxa for which they are named. Further, the original naming is generally derived not from the sensitive strain the bacteriocin kills, but instead the organism that produces the bacteriocin. This makes the use of this naming system a problematic basis for theory; thus the alternative classification systems.
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This naming system is problematic for a number of reasons. First, naming bacteriocins by what they putatively kill would be more accurate if their killing spectrum were contiguous with genus or species designations. The bacteriocins frequently possess spectra that exceed the bounds of their named
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Gram negative bacteriocins are typically classified by size. Microcins are less than 20 kDa in size, colicin-like bacteriocins are 20 to 90 kDa in size and tailocins or so called high molecular weight bacteriocins which are multi subunit bacteriocins that resemble the tails of bacteriophages. This
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screening for antimicrobial activity against suitable targets and subsequently purified using fastidious methods prior to testing. However, since the advent of the genomic era, the availability of the bacterial genome sequences has revolutionized the approach to identifying bacteriocins. Recently
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was the only bacteriocin generally recognized as safe by the FDA and was used as a food preservative in several countries. Generally bacteriocins are not useful as food preservatives because they are expensive to make, are broken down in food products, they harm some proteins in food, and they
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The two types of tailocins differ by their structure; they are both composed of a sheath and a hollow tube forming a long helicoidal hexameric structure attached to a baseplate. There are multiple tail fibers that allow the viral particle to bind to the target cell. However, the R-pyocins are a
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CLBs are distinct from Gram-positive bacteriocins. They are modular proteins between 20 and 90 kDa in size. They often consist of a receptor binding domain, a translocation domain and a cytotoxic domain. Combinations of these domains between different CLBs occur frequently in nature and can be
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The tailocins are coded by prophage sequences in the bacteria genome, and the production will happen when kin bacteria are spotted in the environment of the producer. The particles are synthesized in the center of the cells and after maturation they will migrate to the cell pole via tubulin
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Bacteriocins are categorized in several ways, including producing strain, common resistance mechanisms, and mechanism of killing. There are several large categories of bacteriocin which are only phenomenologically related. These include the bacteriocins from gram-positive bacteria, the
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structure. The tailocins will then be ejected in the medium with the cell lysis. They can be projected up to several tens of micrometers thanks to a very high turgor pressure of the cell. The tailocins released will then recognize and bind to the kin bacteria to kill them.
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Class III bacteriocins are large, heat-labile (>10 kDa) protein bacteriocins. This class is subdivided in two subclasses: subclass IIIa (bacteriolysins) and subclass IIIb. Subclass IIIa comprises those peptides that kill bacterial cells by
567:. They can be further subdivided into R-type and F-type pyocins. Some research was made to identify the pyocins and show how they are involved in the “cell-to-cell” competition of the closely related Pseudomonas bacteria. 1842:
Netz DJ, Sahl HG, Marcelino R, dos Santos Nascimento J, de Oliveira SS, Soares MB, et al. (August 2001). "Molecular characterisation of aureocin A70, a multi-peptide bacteriocin isolated from Staphylococcus aureus".
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Nissen-Meyer J, Rogne P, OppegĂĄrd C, Haugen HS, Kristiansen PE (January 2009). "Structure-function relationships of the non-lanthionine-containing peptide (class II) bacteriocins produced by gram-positive bacteria".
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Netz DJ, Pohl R, Beck-Sickinger AG, Selmer T, Pierik AJ, Bastos M, Sahl HG (June 2002). "Biochemical characterisation and genetic analysis of aureocin A53, a new, atypical bacteriocin from Staphylococcus aureus".
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Bacteriocins were first discovered by André Gratia in 1925. He was involved in the process of searching for ways to kill bacteria, which also resulted in the development of antibiotics and the discovery of
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created in the laboratory. Due to these combinations further subclassification can be based on either import mechanism (group A and B) or on cytotoxic mechanism (nucleases, pore forming, M-type, L-type).
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Kabuki T, Saito T, Kawai Y, Uemura J, Itoh T (February 1997). "Production, purification and characterization of reutericin 6, a bacteriocin with lytic activity produced by Lactobacillus reuteri LA6".
421:(formerly called 'colicines', meaning 'coli killers'). These are the longest studied bacteriocins. They are a diverse group of bacteriocins and do not include all the bacteriocins produced by 1978:
Stepper J, Shastri S, Loo TS, Preston JC, Novak P, Man P, et al. (February 2011). "Cysteine S-glycosylation, a new post-translational modification found in glycopeptide bacteriocins".
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consensus sequence -Tyr-Gly-Asn-Gly-Val-Xaa-Cys across this group. The C-terminal is responsible for species-specific activity, causing cell-leakage by permeabilizing the target cell wall.
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are small (<10 kDa) heat-stable proteins. This class is subdivided into five subclasses. The class IIa bacteriocins (pediocin-like bacteriocins) are the largest subgroup and contain an
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Class IId cover single-peptide bacteriocins, which are not post-translationally modified and do not show the pediocin-like signature. The best example of this group is the highly stable
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killing factors, and are structurally, functionally, and ecologically diverse. Applications of bacteriocins are being tested to assess their application as narrow-spectrum antibiotics.
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Moreover, has been recently demonstrated that bacteriocins active against plant pathogenic bacteria can be expressed in plants to provide robust resistance against plant disease.
533:. Similar bacteriocins (CLBs, colicin-like bacteriocins) occur in other Gram-negative bacteria. CLBs typically target same species and have species-specific names: klebicins from 1195:
Gratia A (1925). "Sur un remarquable exemple d'antagonisme entre deux souches de coilbacille" [On a remarkable example of antagonism between two strains of coilbacille].
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The most recently proposed subclass is the Class IIe, which encompasses those bacteriocins composed of three or four non-pediocin like peptides. The best example is
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Lagos R, Tello M, Mercado G, GarcĂ­a V, Monasterio O (January 2009). "Antibacterial and antitumorigenic properties of microcin E492, a pore-forming bacteriocin".
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have been produced in plants with the aim for them to be used as food additives. The use of bacteriocins in food has been generally regarded as safe by the
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Pandey N, Malik RK, Kaushik JK, Singroha G (November 2013). "Gassericin A: a circular bacteriocin produced by lactic acid bacteria Lactobacillus gasseri".
723:. Subclass IIIb, in contrast, comprises those peptides that do not cause cell lysis, killing the target cells by disrupting plasma membrane potential. 739:
moieties. Confirmation by experimental data was established with the characterisation of sublancin and glycocin F (GccF) by two independent groups.
3572: 3096: 3116: 3632: 1325:"Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature" 268: 256: 101: 89: 2539:
Al Kassaa I, Hober D, Hamze M, Chihib NE, Drider D (December 2014). "Antiviral potential of lactic acid bacteria and their bacteriocins".
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large, rigid contractile tail-like structure whereas the F-pyocins are a small flexible, non-contractile tail-like structure.
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MĂĽller I, Lurz R, Geider K (July 2012). "Tasmancin and lysogenic bacteriophages induced from Erwinia tasmaniensis strains".
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The class IIb bacteriocins (two-peptide bacteriocins) require two different peptides for activity. One such an example is
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cations, but not for divalent cations. Almost all of these bacteriocins have a GxxxG motifs. This motif is also found in
457:(RiPP) natural products have led to the differentiation of lantipeptides from bacteriocins based on biosynthetic genes. 2584:"Structure of the mannose phosphotransferase system (man-PTS) complexed with microcin E492, a pore-forming bacteriocin" 1737:
Heng NC, Wescombe PA, Burton JP, Jack RW, Tagg JR (2007). "The Diversity of Bacteriocins in Gram-Positive Bacteria".
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Nardis C, Mosca L, Mastromarino P (Sep–Oct 2013). "Vaginal microbiota and viral sexually transmitted diseases".
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Bacteriocins from Gram positive bacteria are typically classified into Class I, Class IIa/b/c, and Class III.
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Bacteriocins have been proposed as a replacement for antibiotics to which pathogenic bacteria have become
3323: 678:. This bacteriocin is stable under highly acidic conditions, high temperatures, and is not affected by 316: 149: 2826:"Purification and amino acid sequence of lactocin S, a bacteriocin produced by Lactobacillus sake L45" 3002:
Wescombe PA, Upton M, Dierksen KP, Ragland NL, Sivabalan S, Wirawan RE, et al. (February 2006).
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Cotter PD, Ross RP, Hill C (February 2013). "Bacteriocins - a viable alternative to antibiotics?".
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Schneider T, Hahn-Löbmann S, Stephan A, Schulz S, Giritch A, Naumann M, et al. (March 2018).
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Paškevičius Š, Starkevič U, Misiūnas A, Vitkauskienė A, Gleba Y, Ražanskienė A (3 October 2017).
861: 843: 435:. It is much smaller and produced and secreted in a different manner than the classic colicins. 1580:
Cotter PD, Hill C, Ross RP (October 2005). "Bacteriocins: developing innate immunity for food".
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Cascales E, Buchanan SK, DuchĂ© D, Kleanthous C, Lloubès R, Postle K, et al. (March 2007).
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Schulz S, Stephan A, Hahn S, Bortesi L, Jarczowski F, Bettmann U, et al. (October 2015).
1625:"Structural Basis of Pore Formation in the Mannose Phosphotransferase System by Pediocin PA-1" 3652: 3328: 3155: 2406:"Engineering bacteriocin-mediated resistance against the plant pathogen Pseudomonas syringae" 800: 719: 653: 612: 494: 362:
to inhibit the growth of similar or closely related bacterial strain(s). They are similar to
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studies to see if they can stop viruses from replicating, namely staphylococcin 188 against
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Arnison PG, Bibb MJ, Bierbaum G, Bowers AA, Bugni TS, Bulaj G, et al. (January 2013).
794: 482: 299: 132: 706: 8: 3345: 2123:"BACTIBASE second release: a database and tool platform for bacteriocin characterization" 506:
size classification also coincides with genetic, structural and functional similarities.
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moiety, containing atypical amino acids such as lanthionine), and method of production (
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Rezaei Javan R, van Tonder AJ, King JP, Harrold CL, Brueggemann AB (August 2018).
2290:"Plant-made Salmonella bacteriocins salmocins for control of Salmonella pathovars" 1991: 1880:"Lysostaphin: A Staphylococcal Bacteriolysin with Potential Clinical Applications" 273: 249: 106: 82: 58: 3190: 3185: 3072: 2371: 1239: 893:
MccE492 had been tested on eukaryotic cell lines and in a mouse model of cancer.
865: 237: 70: 1746: 549:. S-type pyocins belong to CLBs, but R- and F-type pyocins belong to tailocins. 2644: 2599: 2404:
Rooney WM, Grinter RW, Correia A, Parkhill J, Walker DC, Milner JJ (May 2020).
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Proceedings of the National Academy of Sciences of the United States of America
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Michel-Briand Y, Baysse C (May 2002). "The pyocins of Pseudomonas aeruginosa".
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activity and broad range of activity. One example of Class IIa bacteriocin is
3646: 2751: 2676:"Antimicrobial activity of a newly identified bacteriocin of Bacillus cereus" 2506: 2193: 1705: 1648: 1067: 474: 375: 186: 2255: 2139: 1929:
Oman TJ, Boettcher JM, Wang H, Okalibe XN, van der Donk WA (February 2011).
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Michel-Briand Y, Baysse C (2002). "The pyocins of Pseudomonas aeruginosa".
2918: 2802: 2759: 2660: 2617: 2560: 2525: 2474: 2439: 2390: 2331: 2274: 2212: 2158: 2107: 2088: 2072:"BACTIBASE: a new web-accessible database for bacteriocin characterization" 2056: 1999: 1964: 1915: 1864: 1856: 1828: 1792: 1723: 1682:"Structural Basis of the Immunity Mechanisms of Pediocin-like Bacteriocins" 1666: 1601: 1564: 1547: 1532: 1483: 1442: 1407: 1358: 1309: 1257: 1173: 818: 736: 592: 450: 2988: 2867: 2717: 1458:"Ribosomally encoded antibacterial proteins and peptides from Pseudomonas" 1291: 3516: 3378: 2466: 2177:"Nanotechnology: A Valuable Strategy to Improve Bacteriocin Formulations" 2038: 1946: 1697: 1640: 1389: 1006: 710: 600: 446: 2652: 2344: 1593: 1372:
Behrens HM, Six A, Walker D, Kleanthous C (April 2017). Walker D (ed.).
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The bacteriocin Putidacin L1 provides robust disease protection against
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degradation, thus causing cell lysis. The best studied bacteriolysin is
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Hammami R, Zouhir A, Le Lay C, Ben Hamida J, Fliss I (January 2010).
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Class IV bacteriocins are defined as complex bacteriocins containing
649: 402: 378:, all within a span of a few years. He called his first discovery a 2021:
de Jong A, van Hijum SA, Bijlsma JJ, Kok J, Kuipers OP (July 2006).
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Zhu, Liyan; Zeng, Jianwei; Wang, Chang; Wang, Jiawei (2022-02-08).
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Two databases of bacteriocins are available: BAGEL and BACTIBASE.
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Alternative methods of classification include: method of killing (
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ribosomally synthesized and post-translationally modified peptide
406: 352: 348: 3426: 3421: 3416: 3411: 3401: 3396: 3391: 3303: 3159: 2347:"Plant-expressed pyocins for control of Pseudomonas aeruginosa" 1769: 1273: 1059: 936: 882: 823: 645: 546: 425:
In fact, one of the oldest known so-called colicins was called
327: 160: 2823: 3592: 3587: 3501: 3253: 3223: 3218: 2880: 2120: 1931:"Sublancin is not a lantibiotic but an S-linked glycopeptide" 1036: 756: 732: 713:, a 27 kDa peptide that hydrolyzes the cell walls of several 596: 490: 363: 355: 3001: 2824:
Mørtvedt CI, Nissen-Meyer J, Sletten K, Nes IF (June 1991).
2403: 2069: 1805: 1224:"André Gratia: a forerunner in microbial and viral genetics" 3619: 3614: 3531: 3521: 3511: 3506: 3316: 3213: 3195: 2674:
Naclerio G, Ricca E, Sacco M, De Felice M (December 1993).
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Hammami R, Zouhir A, Ben Hamida J, Fliss I (October 2007).
289: 244: 220: 122: 77: 52: 40: 2780: 2020: 1371: 3526: 2733:"The circular bacteriocins gassericin A and circularin A" 2538: 2175:
Fahim HA, Khairalla AS, El-Gendy AO (16 September 2016).
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Class IIa bacteriocins have a large potential for use in
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Bogaardt C, van Tonder AJ, Brueggemann AB (July 2015).
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Huang K, Zeng J, Liu X, Jiang T, Wang J (April 2021).
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Zhu, Liyan; Zeng, Jianwei; Wang, Jiawei (2022-06-15).
1548:"What's in a name? Class distinction for bacteriocins" 627:
as well medical applications due to their strong anti-
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Kawai Y, Kemperman R, Kok J, Saito T (October 2004).
1877: 690:, a four-peptide bacteriocin, highly active against 644:, which permeabilizes cell membranes for monovalent 2931: 2023:"BAGEL: a web-based bacteriocin genome mining tool" 1420: 1496: 485:), molecular weight and chemistry (large protein, 2783:World Journal of Microbiology & Biotechnology 2581: 1269: 1267: 856:As of 2014 some bacteriocins had been studied in 16:Class of bacterially produced peptide antibiotics 3644: 3058: 1878:Bastos MD, Coutinho BG, Coelho ML (April 2010). 1147: 1145: 696:, with potential biotechnological applications. 497:, post-ribosomal modifications, non-ribosomal). 3573:LDL-receptor-related protein-associated protein 1622: 1579: 1545: 1497:Vacheron J, Heiman CM, Keel C (January 2021). 1455: 1264: 1151: 578: 500: 477:production inhibition, etc.), genetics (large 3132: 1142: 804:(commonly known as Australian dwarf tobacco). 2170: 2168: 2114: 2063: 1578:is author reply to comment on article : 1546:Cotter PD, Hill C, Ross RP (February 2006). 811: 529:are bacteriocins found in the Gram-negative 521: 460: 2014: 1679: 3139: 3125: 2969:International Journal of Food Microbiology 2446: 1280:Microbiology and Molecular Biology Reviews 185: 3369:Pulmonary surfactant-associated protein C 3364:Pulmonary surfactant-associated protein B 3109:at the U.S. National Library of Medicine 3035: 2908: 2898: 2857: 2707: 2607: 2515: 2505: 2429: 2380: 2370: 2321: 2264: 2254: 2202: 2192: 2165: 2148: 2138: 2097: 2087: 2046: 1954: 1905: 1895: 1713: 1656: 1563: 1522: 1473: 1397: 1348: 1299: 1247: 763:Furthermore, bacteriocins active against 699: 595:are small peptide inhibitors and include 1194: 816:Bacteriocins are made by non-pathogenic 787: 726: 606: 826:and help maintain the stability of the 760:target too narrow a range of microbes. 586: 561:Most well studied are the tailocins of 442:Bacteriocins that contain the modified 3645: 3008:Applied and Environmental Microbiology 2830:Applied and Environmental Microbiology 2680:Applied and Environmental Microbiology 1686:Applied and Environmental Microbiology 1629:Applied and Environmental Microbiology 1221: 449:as part of their structure are called 3633:other cell membrane protein disorders 3120: 2740:Current Protein & Peptide Science 2541:Probiotics and Antimicrobial Proteins 2633:Current Pharmaceutical Biotechnology 1773:Current Pharmaceutical Biotechnology 545:-genus produces bacteriocins called 3336:Myelin oligodendrocyte glycoprotein 1456:Ghequire MG, De Mot R (July 2014). 13: 14: 3664: 3090: 391: 2700:10.1128/AEM.59.12.4313-4316.1993 1378:Emerging Topics in Life Sciences 667:regions are covalentely linked. 3052: 3028:10.1128/aem.72.2.1459-1466.2006 2995: 2960: 2925: 2874: 2850:10.1128/AEM.57.6.1829-1834.1991 2817: 2774: 2724: 2667: 2624: 2575: 2532: 2481: 2397: 2338: 2281: 1971: 1922: 1871: 1835: 1799: 1763: 1730: 1673: 1616: 1539: 877:As of 2009, some bacteriocins, 671:is the prototype of this group. 3605:Phospholipid transfer proteins 3341:Myelin-associated glycoprotein 1490: 1449: 1414: 1365: 1316: 1215: 1188: 663:, in which the N-terminal and 1: 2981:10.1016/s0168-1605(96)01180-4 2946:10.1016/s0300-9084(02)01422-0 1992:10.1016/j.febslet.2011.01.023 1821:10.1016/S0022-2836(02)00368-6 1435:10.1016/S0300-9084(02)01422-0 1136: 284:Available protein structures: 180:Bacteriocin (Lactococcin_972) 117:Available protein structures: 3073:10.1016/j.micres.2012.01.005 2372:10.1371/journal.pone.0185782 2033:(Web Server issue): W273-9. 1845:Journal of Molecular Biology 1809:Journal of Molecular Biology 1582:Nature Reviews. Microbiology 1154:Nature Reviews. Microbiology 1131:Peripheral membrane proteins 742: 556: 509: 405:, and the bacteriocins from 7: 2410:Plant Biotechnology Journal 1747:10.1007/978-3-540-36604-1_4 1552:Nature Reviews Microbiology 1119: 833: 579:From Gram positive bacteria 501:From Gram negative bacteria 10: 3669: 3324:Myelin proteolipid protein 3097:Bagel Bacteriocin Database 2645:10.2174/138920109787048643 2600:10.1038/s41421-021-00253-6 2314:10.1038/s41598-018-22465-9 1785:10.2174/138920109787048661 1515:10.1038/s42003-020-01581-1 1240:10.1093/genetics/156.2.471 1222:Gratia JP (October 2000). 896: 3628: 3560: 3377: 3354: 3302: 3204: 3171: 2900:10.1186/s12864-015-1729-4 2795:10.1007/s11274-013-1368-3 2553:10.1007/s12602-014-9162-6 2494:Frontiers in Microbiology 2181:Frontiers in Microbiology 1462:FEMS Microbiology Reviews 874:against influenza virus. 871:Lactobacillus delbrueckii 812:Relevance to human health 522:Colicin-like bacteriocins 461:Methods of classification 409:. The bacteriocins from 326: 306: 288: 283: 279: 267: 255: 243: 231: 219: 211: 206: 184: 179: 159: 139: 121: 116: 112: 100: 88: 76: 64: 51: 39: 31: 26: 21: 3111:Medical Subject Headings 3061:Microbiological Research 2752:10.2174/1389203043379549 2507:10.3389/fmicb.2018.02012 2194:10.3389/fmicb.2016.01385 191:7.4 kDa Lactococcin 972 2256:10.1073/pnas.1513311112 2140:10.1186/1471-2180-10-22 1935:Nature Chemical Biology 1475:10.1111/1574-6976.12079 1329:Natural Product Reports 1197:Compt. Rend. Soc. Biol. 862:Newcastle disease virus 750: 382:because it was made by 22:Lactococcin-like family 2089:10.1186/1471-2180-7-89 2027:Nucleic Acids Research 1857:10.1006/jmbi.2001.4885 1565:10.1038/nrmicro1273-c2 1503:Communications Biology 1126:Antimicrobial peptides 805: 778:Pseudomonas aeruginosa 700:Class III bacteriocins 693:Listeria monocytogenes 659:Class IIc encompasses 654:transmembrane proteins 564:Pseudomonas aeruginosa 3156:Cell surface receptor 1292:10.1128/MMBR.00036-06 966:epidermin/gallidermin 801:Nicotiana benthamiana 791: 727:Class IV bacteriocins 717:species, principally 613:class II bacteriocins 607:Class II bacteriocins 3356:Pulmonary surfactant 3312:Myelin basic protein 3206:Membrane-spanning 4A 2467:10.7416/ai.2013.1946 1947:10.1038/nchembio.509 1698:10.1128/aem.00481-22 1641:10.1128/AEM.01992-21 1390:10.1042/ETLS20160016 795:Pseudomonas syringae 593:class I bacteriocins 587:Class I bacteriocins 514:See main article on 429:and is now known as 3346:Myelin protein zero 3020:2006ApEnM..72.1459W 2842:1991ApEnM..57.1829M 2692:1993ApEnM..59.4313N 2363:2017PLoSO..1285782P 2306:2018NatSR...8.4078S 2247:2015PNAS..112E5454S 1594:10.1038/nrmicro1273 1166:10.1038/nrmicro2937 537:and pesticins from 3102:BACTIBASE Database 2294:Scientific Reports 2039:10.1093/nar/gkl237 1741:. pp. 45–92. 1341:10.1039/c2np20085f 889:A and E1, and the 828:vaginal microbiome 806: 798:when expressed in 481:, small plasmids, 3640: 3639: 3152:membrane proteins 2422:10.1111/pbi.13294 1897:10.3390/ph3041139 1756:978-3-540-36603-4 1276:"Colicin biology" 625:food preservation 342: 341: 338: 337: 333:structure summary 175: 174: 171: 170: 166:structure summary 3660: 3141: 3134: 3127: 3118: 3117: 3085: 3084: 3056: 3050: 3049: 3039: 2999: 2993: 2992: 2964: 2958: 2957: 2940:(5–6): 499–510. 2929: 2923: 2922: 2912: 2902: 2878: 2872: 2871: 2861: 2821: 2815: 2814: 2778: 2772: 2771: 2737: 2728: 2722: 2721: 2711: 2671: 2665: 2664: 2628: 2622: 2621: 2611: 2579: 2573: 2572: 2536: 2530: 2529: 2519: 2509: 2485: 2479: 2478: 2455:Annali di Igiene 2450: 2444: 2443: 2433: 2416:(5): 1296–1306. 2401: 2395: 2394: 2384: 2374: 2357:(10): e0185782. 2342: 2336: 2335: 2325: 2285: 2279: 2278: 2268: 2258: 2241:(40): E5454-60. 2226: 2217: 2216: 2206: 2196: 2172: 2163: 2162: 2152: 2142: 2127:BMC Microbiology 2118: 2112: 2111: 2101: 2091: 2076:BMC Microbiology 2067: 2061: 2060: 2050: 2018: 2012: 2011: 1975: 1969: 1968: 1958: 1926: 1920: 1919: 1909: 1899: 1890:(4): 1139–1161. 1875: 1869: 1868: 1839: 1833: 1832: 1803: 1797: 1796: 1767: 1761: 1760: 1734: 1728: 1727: 1717: 1692:(13): e0048122. 1677: 1671: 1670: 1660: 1620: 1614: 1613: 1577: 1567: 1543: 1537: 1536: 1526: 1494: 1488: 1487: 1477: 1453: 1447: 1446: 1429:(5–6): 499–510. 1418: 1412: 1411: 1401: 1369: 1363: 1362: 1352: 1320: 1314: 1313: 1303: 1271: 1262: 1261: 1251: 1219: 1213: 1212: 1192: 1186: 1185: 1149: 281: 280: 200: 189: 177: 176: 114: 113: 19: 18: 3668: 3667: 3663: 3662: 3661: 3659: 3658: 3657: 3643: 3642: 3641: 3636: 3624: 3578:Neurofibromin 2 3561:Other/ungrouped 3556: 3373: 3350: 3298: 3200: 3167: 3145: 3093: 3088: 3057: 3053: 3000: 2996: 2965: 2961: 2930: 2926: 2879: 2875: 2822: 2818: 2789:(11): 1977–87. 2779: 2775: 2735: 2729: 2725: 2672: 2668: 2629: 2625: 2580: 2576: 2547:(3–4): 177–85. 2537: 2533: 2486: 2482: 2451: 2447: 2402: 2398: 2343: 2339: 2286: 2282: 2227: 2220: 2173: 2166: 2119: 2115: 2068: 2064: 2019: 2015: 1976: 1972: 1927: 1923: 1884:Pharmaceuticals 1876: 1872: 1840: 1836: 1804: 1800: 1768: 1764: 1757: 1735: 1731: 1678: 1674: 1635:(3): e0199221. 1621: 1617: 1544: 1540: 1495: 1491: 1454: 1450: 1419: 1415: 1370: 1366: 1321: 1317: 1272: 1265: 1220: 1216: 1193: 1189: 1150: 1143: 1139: 1122: 1117: 1020:microbisporicin 899: 866:influenza virus 836: 814: 753: 745: 729: 702: 669:Enterocin AS-48 661:cyclic peptides 609: 589: 581: 559: 524: 512: 503: 489:, with/without 463: 394: 257:OPM superfamily 215:Lactococcin_972 202: 192: 90:OPM superfamily 17: 12: 11: 5: 3666: 3656: 3655: 3638: 3637: 3629: 3626: 3625: 3623: 3622: 3617: 3612: 3607: 3602: 3597: 3596: 3595: 3590: 3580: 3575: 3570: 3564: 3562: 3558: 3557: 3555: 3554: 3549: 3544: 3539: 3534: 3529: 3524: 3519: 3514: 3509: 3504: 3499: 3494: 3489: 3484: 3479: 3474: 3469: 3464: 3459: 3454: 3449: 3444: 3439: 3434: 3429: 3424: 3419: 3414: 3409: 3404: 3399: 3394: 3389: 3383: 3381: 3375: 3374: 3372: 3371: 3366: 3360: 3358: 3352: 3351: 3349: 3348: 3343: 3338: 3333: 3332: 3331: 3321: 3320: 3319: 3308: 3306: 3300: 3299: 3297: 3296: 3291: 3286: 3281: 3276: 3271: 3266: 3261: 3256: 3251: 3246: 3241: 3236: 3231: 3226: 3221: 3216: 3210: 3208: 3202: 3201: 3199: 3198: 3193: 3188: 3183: 3177: 3175: 3169: 3168: 3144: 3143: 3136: 3129: 3121: 3115: 3114: 3104: 3099: 3092: 3091:External links 3089: 3087: 3086: 3051: 3014:(2): 1459–66. 2994: 2959: 2924: 2873: 2836:(6): 1829–34. 2816: 2773: 2723: 2686:(12): 4313–6. 2666: 2623: 2588:Cell Discovery 2574: 2531: 2480: 2445: 2396: 2337: 2280: 2218: 2164: 2113: 2062: 2013: 1970: 1921: 1870: 1834: 1798: 1762: 1755: 1729: 1672: 1615: 1588:(10): 777–88. 1538: 1489: 1448: 1413: 1364: 1315: 1286:(1): 158–229. 1263: 1214: 1187: 1140: 1138: 1135: 1134: 1133: 1128: 1121: 1118: 1116: 1115: 1112: 1109: 1104: 1101: 1098: 1095: 1092: 1089: 1086: 1083: 1080: 1075: 1070: 1065: 1062: 1057: 1056:pneumocyclicin 1054: 1051: 1048: 1045: 1042: 1039: 1034: 1029: 1026: 1021: 1018: 1015: 1012: 1009: 1004: 1001: 998: 995: 992: 989: 986: 981: 978: 975: 970: 967: 964: 961: 956: 953: 950: 947: 942: 939: 934: 931: 928: 925: 922: 919: 916: 913: 910: 907: 904: 900: 898: 895: 844:culture-based 835: 832: 813: 810: 752: 749: 744: 741: 728: 725: 715:Staphylococcus 701: 698: 684: 683: 672: 657: 638: 608: 605: 588: 585: 580: 577: 558: 555: 523: 520: 511: 508: 502: 499: 462: 459: 393: 392:Classification 390: 340: 339: 336: 335: 330: 324: 323: 310: 304: 303: 293: 286: 285: 277: 276: 271: 265: 264: 259: 253: 252: 247: 241: 240: 235: 229: 228: 223: 217: 216: 213: 209: 208: 204: 203: 190: 182: 181: 173: 172: 169: 168: 163: 157: 156: 143: 137: 136: 126: 119: 118: 110: 109: 104: 98: 97: 92: 86: 85: 80: 74: 73: 68: 62: 61: 56: 49: 48: 43: 37: 36: 33: 29: 28: 24: 23: 15: 9: 6: 4: 3: 2: 3665: 3654: 3651: 3650: 3648: 3635: 3634: 3627: 3621: 3618: 3616: 3613: 3611: 3608: 3606: 3603: 3601: 3598: 3594: 3591: 3589: 3586: 3585: 3584: 3581: 3579: 3576: 3574: 3571: 3569: 3566: 3565: 3563: 3559: 3553: 3550: 3548: 3545: 3543: 3540: 3538: 3535: 3533: 3530: 3528: 3525: 3523: 3520: 3518: 3515: 3513: 3510: 3508: 3505: 3503: 3500: 3498: 3495: 3493: 3490: 3488: 3485: 3483: 3480: 3478: 3475: 3473: 3470: 3468: 3465: 3463: 3460: 3458: 3455: 3453: 3450: 3448: 3445: 3443: 3440: 3438: 3435: 3433: 3430: 3428: 3425: 3423: 3420: 3418: 3415: 3413: 3410: 3408: 3405: 3403: 3400: 3398: 3395: 3393: 3390: 3388: 3385: 3384: 3382: 3380: 3376: 3370: 3367: 3365: 3362: 3361: 3359: 3357: 3353: 3347: 3344: 3342: 3339: 3337: 3334: 3330: 3327: 3326: 3325: 3322: 3318: 3315: 3314: 3313: 3310: 3309: 3307: 3305: 3301: 3295: 3292: 3290: 3287: 3285: 3282: 3280: 3277: 3275: 3272: 3270: 3267: 3265: 3262: 3260: 3257: 3255: 3252: 3250: 3247: 3245: 3242: 3240: 3237: 3235: 3232: 3230: 3227: 3225: 3222: 3220: 3217: 3215: 3212: 3211: 3209: 3207: 3203: 3197: 3194: 3192: 3189: 3187: 3184: 3182: 3179: 3178: 3176: 3174: 3170: 3165: 3161: 3157: 3153: 3149: 3142: 3137: 3135: 3130: 3128: 3123: 3122: 3119: 3112: 3108: 3105: 3103: 3100: 3098: 3095: 3094: 3082: 3078: 3074: 3070: 3066: 3062: 3055: 3047: 3043: 3038: 3033: 3029: 3025: 3021: 3017: 3013: 3009: 3005: 2998: 2990: 2986: 2982: 2978: 2975:(2): 145–56. 2974: 2970: 2963: 2955: 2951: 2947: 2943: 2939: 2935: 2928: 2920: 2916: 2911: 2906: 2901: 2896: 2892: 2888: 2884: 2877: 2869: 2865: 2860: 2855: 2851: 2847: 2843: 2839: 2835: 2831: 2827: 2820: 2812: 2808: 2804: 2800: 2796: 2792: 2788: 2784: 2777: 2769: 2765: 2761: 2757: 2753: 2749: 2745: 2741: 2734: 2727: 2719: 2715: 2710: 2705: 2701: 2697: 2693: 2689: 2685: 2681: 2677: 2670: 2662: 2658: 2654: 2650: 2646: 2642: 2638: 2634: 2627: 2619: 2615: 2610: 2605: 2601: 2597: 2593: 2589: 2585: 2578: 2570: 2566: 2562: 2558: 2554: 2550: 2546: 2542: 2535: 2527: 2523: 2518: 2513: 2508: 2503: 2499: 2495: 2491: 2484: 2476: 2472: 2468: 2464: 2461:(5): 443–56. 2460: 2456: 2449: 2441: 2437: 2432: 2427: 2423: 2419: 2415: 2411: 2407: 2400: 2392: 2388: 2383: 2378: 2373: 2368: 2364: 2360: 2356: 2352: 2348: 2341: 2333: 2329: 2324: 2319: 2315: 2311: 2307: 2303: 2299: 2295: 2291: 2284: 2276: 2272: 2267: 2262: 2257: 2252: 2248: 2244: 2240: 2236: 2232: 2225: 2223: 2214: 2210: 2205: 2200: 2195: 2190: 2186: 2182: 2178: 2171: 2169: 2160: 2156: 2151: 2146: 2141: 2136: 2132: 2128: 2124: 2117: 2109: 2105: 2100: 2095: 2090: 2085: 2081: 2077: 2073: 2066: 2058: 2054: 2049: 2044: 2040: 2036: 2032: 2028: 2024: 2017: 2009: 2005: 2001: 1997: 1993: 1989: 1986:(4): 645–50. 1985: 1981: 1974: 1966: 1962: 1957: 1952: 1948: 1944: 1940: 1936: 1932: 1925: 1917: 1913: 1908: 1903: 1898: 1893: 1889: 1885: 1881: 1874: 1866: 1862: 1858: 1854: 1851:(5): 939–49. 1850: 1846: 1838: 1830: 1826: 1822: 1818: 1815:(3): 745–56. 1814: 1810: 1802: 1794: 1790: 1786: 1782: 1778: 1774: 1766: 1758: 1752: 1748: 1744: 1740: 1733: 1725: 1721: 1716: 1711: 1707: 1703: 1699: 1695: 1691: 1687: 1683: 1676: 1668: 1664: 1659: 1654: 1650: 1646: 1642: 1638: 1634: 1630: 1626: 1619: 1611: 1607: 1603: 1599: 1595: 1591: 1587: 1583: 1575: 1571: 1566: 1561: 1557: 1553: 1549: 1542: 1534: 1530: 1525: 1520: 1516: 1512: 1508: 1504: 1500: 1493: 1485: 1481: 1476: 1471: 1468:(4): 523–68. 1467: 1463: 1459: 1452: 1444: 1440: 1436: 1432: 1428: 1424: 1417: 1409: 1405: 1400: 1395: 1391: 1387: 1383: 1379: 1375: 1368: 1360: 1356: 1351: 1346: 1342: 1338: 1335:(1): 108–60. 1334: 1330: 1326: 1319: 1311: 1307: 1302: 1297: 1293: 1289: 1285: 1281: 1277: 1270: 1268: 1259: 1255: 1250: 1245: 1241: 1237: 1233: 1229: 1225: 1218: 1210: 1206: 1202: 1199:(in French). 1198: 1191: 1183: 1179: 1175: 1171: 1167: 1163: 1160:(2): 95–105. 1159: 1155: 1148: 1146: 1141: 1132: 1129: 1127: 1124: 1123: 1113: 1110: 1108: 1105: 1102: 1099: 1096: 1093: 1090: 1087: 1084: 1081: 1079: 1076: 1074: 1071: 1069: 1068:reutericyclin 1066: 1063: 1061: 1058: 1055: 1052: 1049: 1046: 1044:planosporicin 1043: 1041:paenibacillin 1040: 1038: 1035: 1033: 1030: 1027: 1025: 1022: 1019: 1016: 1013: 1010: 1008: 1005: 1002: 999: 996: 993: 990: 987: 985: 982: 979: 976: 974: 971: 968: 965: 962: 960: 957: 954: 951: 948: 946: 943: 940: 938: 935: 932: 929: 926: 923: 920: 917: 914: 911: 908: 905: 902: 901: 894: 892: 888: 884: 880: 875: 873: 872: 867: 863: 859: 854: 852: 851: 845: 841: 831: 829: 825: 821: 820: 809: 803: 802: 797: 796: 790: 786: 784: 780: 779: 774: 773: 768: 767: 761: 758: 748: 740: 738: 734: 724: 722: 721: 716: 712: 708: 697: 695: 694: 689: 681: 677: 673: 670: 666: 662: 658: 655: 651: 647: 643: 642:lactococcin G 639: 636: 635:pediocin PA-1 632: 631: 626: 622: 621: 620: 618: 614: 604: 602: 598: 594: 584: 576: 572: 568: 566: 565: 554: 550: 548: 544: 540: 539:Yersia pestis 536: 532: 528: 519: 517: 507: 498: 496: 492: 488: 484: 480: 476: 475:peptidoglycan 472: 468: 458: 456: 452: 448: 445: 440: 436: 434: 433: 428: 424: 420: 419: 414: 413: 408: 404: 400: 389: 388: 386: 381: 377: 376:bacteriophage 371: 369: 365: 361: 357: 354: 350: 349:proteinaceous 346: 334: 331: 329: 325: 322: 318: 314: 311: 309: 305: 301: 297: 294: 291: 287: 282: 278: 275: 272: 270: 266: 263: 260: 258: 254: 251: 248: 246: 242: 239: 236: 234: 230: 227: 224: 222: 218: 214: 210: 205: 199: 195: 188: 183: 178: 167: 164: 162: 158: 155: 151: 147: 144: 142: 138: 134: 130: 127: 124: 120: 115: 111: 108: 105: 103: 99: 96: 93: 91: 87: 84: 81: 79: 75: 72: 69: 67: 63: 60: 57: 54: 50: 47: 44: 42: 38: 34: 30: 25: 20: 3653:Bacteriocins 3630: 3164:cytoskeleton 3154:(other than 3107:Bacteriocins 3067:(7): 381–7. 3064: 3060: 3054: 3011: 3007: 2997: 2972: 2968: 2962: 2937: 2933: 2927: 2890: 2887:BMC Genomics 2886: 2876: 2833: 2829: 2819: 2786: 2782: 2776: 2746:(5): 393–8. 2743: 2739: 2726: 2683: 2679: 2669: 2653:10533/142500 2639:(1): 74–85. 2636: 2632: 2626: 2591: 2587: 2577: 2544: 2540: 2534: 2497: 2493: 2483: 2458: 2454: 2448: 2413: 2409: 2399: 2354: 2350: 2340: 2297: 2293: 2283: 2238: 2234: 2184: 2180: 2130: 2126: 2116: 2079: 2075: 2065: 2030: 2026: 2016: 1983: 1980:FEBS Letters 1979: 1973: 1941:(2): 78–80. 1938: 1934: 1924: 1887: 1883: 1873: 1848: 1844: 1837: 1812: 1808: 1801: 1779:(1): 19–37. 1776: 1772: 1765: 1739:Bacteriocins 1738: 1732: 1689: 1685: 1675: 1632: 1628: 1618: 1585: 1581: 1555: 1551: 1541: 1506: 1502: 1492: 1465: 1461: 1451: 1426: 1422: 1416: 1384:(1): 65–74. 1381: 1377: 1367: 1332: 1328: 1318: 1283: 1279: 1234:(2): 471–6. 1231: 1227: 1217: 1200: 1196: 1190: 1157: 1153: 1100:trifolitoxin 1091:sulfolobicin 1064:reutericin 6 1017:mesentericin 977:gassericin A 941:circularin A 921:aureocin A70 918:aureocin A53 876: 869: 857: 855: 848: 837: 819:Lactobacilli 817: 815: 807: 799: 793: 776: 770: 764: 762: 755:As of 2016, 754: 746: 737:carbohydrate 730: 718: 714: 703: 691: 688:aureocin A70 687: 685: 676:aureocin A53 675: 668: 641: 634: 628: 610: 601:lantibiotics 590: 582: 573: 569: 562: 560: 551: 542: 538: 534: 530: 525: 513: 504: 467:pore-forming 464: 451:lantibiotics 441: 437: 430: 426: 422: 416: 410: 395: 383: 379: 372: 358:produced by 345:Bacteriocins 344: 343: 3379:Tetraspanin 2500:(9): 2012. 2300:(1): 4078. 1209:10027104803 1097:thuricin 17 1082:salivaricin 1053:plantaricin 1007:lysostaphin 997:lactococcin 988:haloduracin 963:enterolysin 930:carnocyclin 906:actagardine 711:lysostaphin 543:Pseudomonas 483:chromosomal 447:lanthionine 415:are called 269:OPM protein 207:Identifiers 102:OPM protein 35:Lactococcin 27:Identifiers 3583:Presenilin 2893:(1): 554. 1558:(2): 160. 1203:: 1040–2. 1137:References 1111:warnericin 1028:microcin S 1014:mersacidin 994:lactocin S 980:glycinecin 973:gardimycin 969:erwiniocin 949:curvaticin 847:developed 772:Salmonella 665:C-terminal 617:N-terminal 599:and other 535:Klebsiella 473:activity, 444:amino acid 432:microcin V 368:paramecium 296:structures 129:structures 3631:see also 3610:Dysferlin 2934:Biochimie 2594:(1): 20. 2133:(1): 22. 2082:(1): 89. 1706:1098-5336 1649:1098-5336 1509:(4): 87. 1423:Biochimie 1107:vibriocin 1094:tasmancin 1085:sublancin 1011:macedocin 1003:leucoccin 959:enterocin 955:duramycin 879:cytolysin 850:in silico 840:resistant 743:Databases 720:S. aureus 707:cell wall 680:proteases 650:potassium 557:Tailocins 516:microcins 510:Microcins 495:ribosomal 427:colicin V 403:microcins 238:IPR006540 71:IPR007464 3647:Category 3568:Calnexin 3173:Arrestin 3081:22381912 3046:16461700 2954:12423794 2919:26215050 2811:30931536 2803:23712477 2768:25735597 2760:15544534 2661:19149591 2618:33820910 2569:43785241 2561:24880436 2526:30210481 2475:24048183 2440:31705720 2391:28973027 2351:PLOS ONE 2332:29511259 2275:26351689 2213:27695440 2187:: 1385. 2159:20105292 2108:17941971 2057:16845009 2008:29992601 2000:21251913 1965:21196935 1916:27713293 1865:11531330 1829:12054867 1793:19149588 1724:35703550 1667:34851716 1610:19040535 1602:16205711 1574:29421506 1533:33469108 1484:24923764 1443:12423794 1408:33525816 1359:23165928 1310:17347522 1258:11014798 1228:Genetics 1182:37563756 1174:23268227 1120:See also 1114:warnerin 1103:variacin 1088:subtilin 1073:reuterin 1050:pentocin 1047:pediocin 1024:microcin 1000:lacticin 991:klebicin 952:divercin 933:caseicin 927:carnocin 915:aureocin 912:alveicin 903:acidocin 891:microcin 887:colicins 858:in vitro 834:Research 630:Listeria 527:Colicins 479:plasmids 471:nuclease 423:E. coli. 418:colicins 399:colicins 380:colicine 360:bacteria 353:peptidic 313:RCSB PDB 233:InterPro 146:RCSB PDB 66:InterPro 3552:TSPAN34 3547:TSPAN33 3542:TSPAN32 3537:TSPAN31 3532:TSPAN30 3527:TSPAN29 3522:TSPAN28 3517:TSPAN27 3512:TSPAN26 3507:TSPAN25 3502:TSPAN24 3497:TSPAN23 3492:TSPAN22 3487:TSPAN21 3482:TSPAN20 3477:TSPAN19 3472:TSPAN18 3467:TSPAN17 3462:TSPAN16 3457:TSPAN15 3452:TSPAN14 3447:TSPAN13 3442:TSPAN12 3437:TSPAN11 3432:TSPAN10 3160:enzymes 3150:: cell 3148:Protein 3037:1392966 3016:Bibcode 2989:9039561 2910:4517551 2868:1872611 2838:Bibcode 2718:8285719 2688:Bibcode 2609:8021565 2517:6120550 2431:7152609 2382:5626474 2359:Bibcode 2323:5840360 2302:Bibcode 2266:4603501 2243:Bibcode 2204:5026012 2150:2824694 2099:2211298 2048:1538908 1956:3060661 1907:4034026 1715:9275228 1658:8824269 1524:7815802 1399:7243282 1350:3954855 1301:1847374 1249:1461273 1078:sakacin 1032:mutacin 984:halocin 945:colicin 909:agrocin 897:By name 822:in the 766:E. coli 547:pyocins 531:E. coli 487:peptide 412:E. coli 407:Archaea 385:E. coli 226:PF09683 201:​ 46:PF04369 3427:TSPAN9 3422:TSPAN8 3417:TSPAN7 3412:TSPAN6 3407:TSPAN5 3402:TSPAN4 3397:TSPAN3 3392:TSPAN2 3387:TSPAN1 3304:Myelin 3294:MS4A18 3289:MS4A15 3284:MS4A14 3279:MS4A13 3274:MS4A12 3269:MS4A10 3259:MS4A8B 3249:MS4A6E 3244:MS4A6A 3234:MS4A4E 3229:MS4A4A 3162:, and 3113:(MeSH) 3079:  3044:  3034:  2987:  2952:  2917:  2907:  2866:  2859:183476 2856:  2809:  2801:  2766:  2758:  2716:  2709:195902 2706:  2659:  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Index

Pfam
PF04369
Pfam
CL0400
InterPro
IPR007464
TCDB
1.C.22
OPM superfamily
141
OPM protein
6gnz
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary

PDB
2LGN
Pfam
PF09683
InterPro
IPR006540
TCDB
1.C.37

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