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Including this template will automatically result in the addition of relevant categories based on the properties of the gene. These include
Category:Human proteins and categories that correspond to the chromosome where the gene is located, such as Category:Genes on human chromosome 19. Other
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to the top of a gene page. The infobox is populated via the
Wikidata item of the page it resides on. To view which Wikidata item is linked to a page, follow the "Wikidata items" link from the "Tools" menu to the left of the article.
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Any page can display the infobox even if it does not have a gene or protein interwiki link. The
Wikidata item must be explicitly added as a parameter and the underlying module is invoked. For instance, appending
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to the top of a protein page. The infobox is populated by using the
Wikidata item of the protein to find the encoded gene item and then uses the gene item to populate the infobox.
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Data structure of gene and protein data in
Wikidata is a bit complex. Even if there is only one gene/protein article in Knowledge, there are many data pages in Wikidata.
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Basically
Wikidata has distinct pages for gene and protein each, for respective species (See the table below). And pages are interconnected based on following rules.
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Gene and protein pages are interconnected through "encodes (d:P:P688)" and "encoded by (d:P:P702)" property claims (horizontal arrows "โ", "โ" in the table).
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Gene pages from different species are interconnected through "ortholog (d:P:P684)" property claims (vertical arrows "โ", "โ" in the table).
1693:
Huss, Jon W; Orozco, Camilo; Goodale, James; Wu, Chunlei; Batalov, Serge; Vickers, Tim J; Valafar, Faramarz; Su, Andrew I (8 July 2008).
195:"An Error has occurred retrieving Wikidata item for infobox" Indicates a non gene/protein Wikidata item or an incomplete Wikidata item.
187:. QID is the Wikidata gene item used to populate the infobox. Substitute the wikidata item id (QID) of interest as the QID parameter.
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HHG1, HLP3, HPE3, MCOPCB5, SMMCI, TPT, TPTPS, sonic hedgehog, Sonic hedgehog, ShhNC, sonic hedgehog signaling molecule
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The followings are list of data which are used in this template. Showing data example and data location in the case of
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The data which infobox_gene shows to readers are collected from somewhere of this interconnected
Wikidata pages.
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This is the
Infobox gene template. The data in the infobox is sourced from Wikidata. The
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categories added manually to the article apart from the template will work as usual.
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1671:- Enormous biomedical data in Wikidata are mostly posted and maintained by this bot
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and changes may be widely noticed. Test changes in the template's
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and other content that is not part of the original template page.
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Knowledge articles are connected to
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In some cases, Knowledge article page is connected to Human
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In most cases, Knowledge article page is connected to Human
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to the top of any page will create an infobox for the gene
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1695:"A Gene Wiki for Community Annotation of Gene Function"
181:{{#invoke:Infobox_gene|getTemplateData|QID=Q414043}}
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137:implementation of this template is located at
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167:{{infobox gene}}
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1656:Template:GNF Protein box
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160:Usage on a protein page
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1205:โข calcium ion binding
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47:Template:Infobox gene
18:Template:Infobox gene
1669:d:User:ProteinBoxBot
1511:Cytogenetic location
1221:โข hydrolase activity
1219:โข morphogen activity
1211:โข peptidase activity
611:Mouse gene data page
522:Human gene data page
395:Mouse gene data page
324:Human gene data page
174:Usage on other pages
145:Usage on a gene page
109:This template uses
1675:Knowledge:Gene Wiki
1485:Chromosome category
1215:โข laminin-1 binding
1207:โข metal ion binding
139:Module:Infobox gene
118:Module:Infobox gene
1599:Strand orientation
1411:human chromosome 7
1213:โข zinc ion binding
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1630:Similar templates
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1459:Chromosome length
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1209:โข patched binding
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1698:
1658:- historical
1328:XP_011514782
1324:XP_011514781
1320:NP_001297391
1282:XM_047420718
1278:XM_011516480
1274:XM_011516479
1262:NM_001310462
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1705:(7): e175.
1570:Genomic end
843:gene symbol
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400:d:Q14860079
329:d:Q14860072
1578:155604967
1549:155592680
1467:159345973
1401:Chromosome
1307:Protein ID
1084:HomoloGene
1065:MGI:98297
659:ortholog (
622:โencodes (
588:ortholog (
533:โencodes (
513:(Article)
443:ortholog (
406:โencodes (
372:ortholog (
357:d:Q2477760
335:โencodes (
293:(Protein)
239:) through
199:Categories
83:/testcases
53:categories
37:This is a
1316:NP_000184
1270:NR_132319
1266:NR_132318
1258:NM_000193
996:EC number
782:Gene name
776:Q14860215
771:Q14860079
761:Q14860072
716:property
553:Reelin (
527:d:Q414043
511:Knowledge
506:(Protein)
279:(Article)
277:Knowledge
91:talk page
1721:18613750
1663:See also
766:Q2477760
714:Wikidata
661:d:P:P684
642:Reelin (
632:d:P:P702
624:d:P:P688
590:d:P:P684
543:d:P:P702
535:d:P:P688
504:Wikidata
497:Wikidata
445:d:P:P684
416:d:P:P702
408:d:P:P688
374:d:P:P684
345:d:P:P702
337:d:P:P688
291:Wikidata
284:Wikidata
79:/sandbox
1520:7q36.3
1351:Ensembl
1036:600725
974:Q15465
964:UniProt
934:Gene ID
932:Ensembl
872:Gene ID
815:Aliases
811:Aliases
753:Protein
739:Protein
483:protein
237:#Case B
233:#Case A
122:sandbox
42:subpage
1719:
1687:BioGPS
1305:RefSeq
1249:RNA ID
1247:RefSeq
1094:30961
870:Entrez
725:Other
614:Reln (
607:Mouse
578:Reelin
525:RELN (
518:Human
499:(Gene)
487:Reelin
477:Case B
298:Human
286:(Gene)
257:Case A
1603:P2548
1516:P4196
1463:P2043
1437:P1813
1406:P1057
901:Image
880:6469
786:Label
755:Page
751:Mouse
748:Page
744:Mouse
741:Page
737:Human
734:Page
730:Human
711:Data
665:โใใใโ
657:โใใใโ
594:โใใใโ
586:โใใใโ
449:โใใใโ
441:โใใใโ
398:Shh (
387:Mouse
378:โใใใโ
370:โใใใโ
327:SHH (
16:<
1717:PMID
1574:P645
1545:P644
1489:P910
1357:P704
1311:P637
1253:P639
1201:P682
1197:P681
1193:P680
1161:P692
1135:3MXW
1131:3M1N
1127:3HO5
1122:P638
1090:P593
1061:P671
1032:P492
1026:OMIM
1001:P591
970:P352
938:P594
876:P351
851:SHH
847:P353
841:HGNC
790:SHH
746:Gene
732:Gene
263:gene
185:RELN
164:Add
149:Add
45:for
1707:doi
1116:PDB
1055:MGI
905:P18
135:Lua
111:Lua
81:or
1715:.
1701:.
1697:.
1441:7
1118:id
1086:ID
1057:ID
1028:ID
966:ID
705:.
646:)
634:)โ
626:)โ
618:)
570:โ
557:)
545:)โ
537:)โ
529:)
489:.
470:โฎ
430:)
418:)โ
410:)โ
402:)
359:)
347:)โ
339:)โ
331:)
320:โ
269:.
141:.
113::
1723:.
1709::
1703:6
1618:โ
1611:โ
1589:โ
1582:โ
1560:โ
1553:โ
1531:โ
1524:โ
1504:โ
1479:โ
1453:โ
1423:โ
1416:โ
1390:โ
1383:โ
1342:โ
1335:โ
1294:โ
1287:โ
1238:โ
1231:โ
1173:โ
1149:โ
1142:โ
1105:โ
1098:โ
1073:โ
1040:โ
1017:โ
1010:โ
987:โ
980:โ
953:โ
946:โ
917:โ
891:โ
884:โ
855:โ
830:โ
823:โ
801:โ
794:โ
686:โฎ
681:โฎ
678:โฎ
663:)
592:)
566:โ
564:โ
560:โ
465:โฎ
458:โฎ
447:)
376:)
316:โ
314:โ
310:โ
124:)
120:(
49:.
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