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Vector (molecular biology)

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313:, the template on which protein may be produced through translation. A larger number of mRNAs would express a greater amount of protein, and how many copies of mRNA are generated depends on the promoter used in the vector. The expression may be constitutive, meaning that the protein is produced constantly in the background, or it may be inducible whereby the protein is expressed only under certain condition, for example when a chemical inducer is added. These two different types of expression depend on the types of promoter and 1253: 198: 225:
cleavage sites allow for the insertion of a transgene insert. The bacteria containing the plasmids can generate millions of copies of the vector within the bacteria in hours, and the amplified vectors can be extracted from the bacteria for further manipulation. Plasmids may be used specifically as
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sequence that drives expression of the transgene. Simpler vectors called transcription vectors are only capable of being transcribed but not translated: they can be replicated in a target cell but not expressed, unlike expression vectors. Transcription vectors are used to amplify their insert.
298:(HACs). An artificial chromosome can carry a much larger DNA fragment than other vectors. YACs and BACs can carry a DNA fragment up to 300,000 nucleotides long. Three structural necessities of an artificial chromosome include an origin of replication, a centromere, and telomeric end sequences. 259:
are genetically engineered viruses carrying modified viral DNA or RNA that has been rendered noninfectious, but still contain viral promoters and the transgene, thus allowing for translation of the transgene through a viral promoter. However, because viral vectors frequently lack infectious
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Viral promoters are often used for constitutive expression in plasmids and in viral vectors because they normally force constant transcription in many cell lines and types reliably. Inducible expression depends on promoters that respond to the induction conditions: for example, the
109:) and a larger sequence that serves as the "backbone" of the vector. The purpose of a vector which transfers genetic information to another cell is typically to isolate, multiply, or express the insert in the target cell. All vectors may be used for cloning and are therefore 579:. Some of these tags may also allow for increased solubility of the target protein. The target protein is fused to the protein tag, but a protease cleavage site positioned in the polypeptide linker region between the protein and the tag allows the tag to be removed later. 365:
produced, they therefore require more components than the simpler transcription-only vectors. Expression in different host organism would require different elements, although they share similar requirements, for example a promoter for initiation of transcription, a
113:, but there are also vectors designed specially for cloning, while others may be designed specifically for other purposes, such as transcription and protein expression. Vectors designed specifically for the expression of the transgene in the target cell are called 137:. Such vectors have bacterial or viral elements which may be transferred to the non-bacterial host organism, however other vectors termed intragenic vectors have also been developed to avoid the transfer of any genetic material from an alien species. 556:
Targeting sequence: Expression vectors may include encoding for a targeting sequence in the finished protein that directs the expressed protein to a specific organelle in the cell or specific location such as the
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sequences, they require helper viruses or packaging lines for large-scale transfection. Viral vectors are often designed to permanently incorporate the insert into the host genome, and thus leave distinct
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are double-stranded extra chromosomal and generally circular DNA sequences that are capable of replication using the host cell's replication machinery. Plasmid vectors minimalistically consist of an
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mRNA production. These vectors are called transcription vectors. They may lack the sequences necessary for polyadenylation and termination, therefore may not be used for protein production.
529:, and an insert successfully ligated into the vector will disrupt the gene sequence, resulting in an inactive β-galactosidase. Cells containing vector with an insert may be identified using 507:: Some vectors may contain a sequence for a specific epitope that can be incorporated into the expressed protein. It allows for antibody identification of cells expressing the target protein. 541:). Cells expressing β-galactosidase (therefore does not contain an insert) appear as blue colonies. White colonies would be selected as those that may contain an insert. Other commonly used 438:
length: UTRs contain specific characteristics that may impede transcription or translation, and thus the shortest UTRs or none at all are encoded for in optimal expression vectors.
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of the cloned gene is a necessary component of the vector when expression of the gene is required: one gene may be amplified through transcription to generate multiple copies of
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conjugative - mediate DNA transfer through conjugation and therefore spread rapidly among the bacterial cells of a population; e.g., F plasmid, many R and some col plasmids.
1215: 133:. However, vectors may also have elements that allow them to be maintained in another organism such as yeast, plant or mammalian cells, and these vectors are called 470:: Promoters are used to drive the transcription of the vector's transgene as well as the other genes in the vector such as the antibiotic resistance gene. Some 457:
Modern artificially-constructed vectors contain essential components found in all vectors, and may contain other additional features found only in some vectors:
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Johnston C, Martin B, Fichant G, Polard P, Claverys JP (March 2014). "Bacterial transformation: distribution, shared mechanisms and divergent control".
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need not have a promoter for the cloned insert but it is an essential component of expression vectors so that the cloned product may be expressed.
567:: Some expression vectors include proteins or peptide sequences that allows for easier purification of the expressed protein. Examples include 708: 941: 513:: Some vectors may contain a reporter gene that allow for identification of plasmid that contains inserted DNA sequence. An example is 226:
transcription vectors and such plasmids may lack crucial sequences for protein expression. Plasmids used for protein expression, called
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that allows for semi-independent replication of the plasmid in the host. Plasmids are found widely in many bacteria, for example in
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allow for survival of cells that have taken up the vector in growth media containing antibiotics through antibiotic selection.
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pattern after insertion that is detectable and indicates that the viral vector has incorporated into the host genome.
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del Solar, Gloria; Giraldo, Rafael; Ruiz-EchevarrĂ­a, MarĂ­a JesĂşs; Espinosa, Manuel; DĂ­az-Orejas, RamĂłn (June 1998).
491:: Genetic markers for viral vectors allow for confirmation that the vector has integrated with the host genomic DNA. 645: 291: 79: 482: 640: 635: 295: 287: 1273: 1243: 102: 572: 546: 322: 141: 427:: Creates a polyadenylation tail at the end of the transcribed pre-mRNA that protects the mRNA from 441: 306: 182: 82:. Of these, the most commonly used vectors are plasmids. Common to all engineered vectors are an 576: 408: 20: 1278: 367: 269: 730: 923: 629: 478: 461: 401: 358: 231: 218: 171: 87: 83: 47: 1073:"A comparative analysis of constitutive promoters located in adeno-associated viral vectors" 404:(RBS) - follows the promoter, and promotes efficient translation of the protein of interest. 1084: 1004: 217:. These plasmid are generally non-conjugative but may have many more features, notably a " 8: 1132:"Viral promoters can initiate expression of toxin genes introduced into Escherichia coli" 1071:
Damdindorj L, Karnan S, Ota A, Hossain E, Konishi Y, Hosokawa Y, Konishi H (2014-08-29).
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for eukaryotic cells, although insertion of a viral vector is often called transduction.
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nonconjugative - do not mediate DNA through conjugation, e.g., many R and col plasmids.
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or other features that allow for the insertion of foreign DNA into the vector through
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and ensures transcriptional and translational termination: stabilizes mRNA production.
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Plasmids with specially-constructed features are commonly used in laboratory for
63: 59: 55: 1257: 1229: 700: 599: 488: 464:: Necessary for the replication and maintenance of the vector in the host cell. 435: 261: 214: 206: 162: 134: 110: 51: 444:: Vectors should encode for a Kozak sequence in the mRNA, which assembles the 357:
produce proteins through the transcription of the vector's insert followed by
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Lodish H, Berk A, Zipursky SL, Matsudaira P, Baltimore D, Darnell J (2000).
1167: 1148: 1116: 777: 594: 395: 251: 186:. Bacterial plasmids may be conjugative/transmissible and non-conjugative: 145: 43: 1024: 908: 180:, but may also be found in a few eukaryotes, for example in yeast such as 995:
Murray, Andrew; Szostak, Jack (November 1987). "Artificial Chromosomes".
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Promoter - commonly used inducible promoters are promoters derived from
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Artificial chromosomes are manufactured chromosomes in the context of
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vectors, which contain elements necessary for their maintenance in
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in the host genome after incorporating the transgene. For example,
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enclosed in the RBS, 8 base-pairs upstream of the AUG start codon.
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Some vectors are designed for transcription only, for example for
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Eukaryote expression vectors require sequences that encode for:
836:(4th ed.). Sudbury, Mass.: Jones and Bartlett Publishers. 230:, would include elements for translation of protein, such as a 202: 197: 75: 39: 398:, which are a hybrid of both the Trp and Lac Operon promoters. 1130:
Lewin A, Mayer M, Chusainow J, Jacob D, Appel B (June 2005).
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Insertion of a vector into the target cell is usually called
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heat shock promoter only initiates after high temperatures.
1042:(8th ed.). Belmont, CA: Brooks/Cole Thomson Learning. 755: 362: 310: 1070: 1225:
A comparison of vectors in use for clinical gene transfer
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plasmid is one of the first plasmids widely used as a
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for translation initiation, and termination signals.
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Culture of Animal Cells: A manual of basic technique
46:) used as a vehicle to artificially carry a foreign 1190:. Hoboken, New Jersey: John Wiley & Sons, Inc. 829: 1037: 962:Julin, Douglas (2014). "Artificial Chromosomes". 125:The manipulation of DNA is normally conducted on 1265: 373: 497:resistance: Vectors with antibiotic-resistance 415: 928:Gene Cloning and DNA Analysis: An Introduction 390:promoter. Other strong promoters used include 994: 525:. A multiple cloning site is located within 325:promoter only initiates transcription after 62:. A vector containing foreign DNA is termed 517:which codes for the N-terminus fragment of 871:Microbiology and Molecular Biology Reviews 827: 1157: 1147: 1106: 1096: 898: 732:Principles of Plant Genetics and Breeding 707:(4th ed.). New York: W. H. Freeman. 663: 275: 1213:Waksman Scholars introduction to vectors 1185: 966:. Springer, New York, NY. pp. 1–3. 533:by growing cells in media containing an 196: 16:Transfers genetic material between cells 1038:Solomon EP, Berg LR, Martin DW (2005). 728: 1266: 282:Artificial chromosome (disambiguation) 97:The vector itself generally carries a 66:. The four major types of vectors are 961: 921: 632:, an organism that transmits disease 13: 1178: 701:"DNA Cloning with Plasmid Vectors" 151: 14: 1290: 1206: 1017:10.1038/scientificamerican1187-62 930:(6th ed.). Wiley-Blackwell. 832:Genetics: principles and analysis 1251: 646:Bacterial artificial chromosomes 301: 292:bacterial artificial chromosomes 245: 1123: 1064: 1031: 988: 944:from the original on 2022-12-17 810:from the original on 2018-04-17 711:from the original on 2009-05-27 681:from the original on 2019-07-08 972:10.1007/978-1-4614-6436-5_91-3 955: 915: 883:10.1128/MMBR.62.2.434-464.1998 858: 821: 792: 749: 722: 692: 407:Translation initiation site - 1: 735:. John Wiley & Sons Inc. 656: 374:Prokaryotes expression vector 343: 101:sequence that consists of an 50:– usually DNA – into another 1098:10.1371/journal.pone.0106472 758:Nature Reviews. Microbiology 729:Acquaah G (16 August 2012). 641:Yeast artificial chromosomes 636:Human artificial chromosomes 477:Cloning site: This may be a 448:for translation of the mRNA. 416:Eukaryotes expression vector 296:human artificial chromosomes 288:yeast artificial chromosomes 7: 828:Hartl DL, Jones EW (1998). 583: 452: 156: 10: 1295: 1186:Freshney IR (2005-07-29). 347: 323:murine mammary tumor virus 279: 249: 160: 18: 573:glutathione-S-transferase 565:Protein purification tags 547:green fluorescent protein 521:, an enzyme that digests 268:leaves a characteristic 183:Saccharomyces cerevisiae 964:Molecular Life Sciences 577:maltose binding protein 409:Shine-Dalgarno sequence 117:, and generally have a 34:is any particle (e.g., 1149:10.1186/1472-6750-5-19 705:Molecular Cell Biology 368:ribosomal binding site 276:Artificial chromosomes 270:retroviral integration 210: 80:artificial chromosomes 630:Vector (epidemiology) 479:multiple cloning site 462:Origin of replication 402:Ribosome binding site 232:ribosome binding site 219:multiple cloning site 200: 172:origin of replication 144:for bacterial cells, 84:origin of replication 531:blue/white selection 425:Polyadenylation tail 329:application and the 19:For other uses, see 1230:Gene Transport Unit 1089:2014PLoSO...9j6472D 1009:1987SciAm.257e..62M 997:Scientific American 770:10.1038/nrmicro3199 499:open reading frames 1235:2007-12-06 at the 1218:2008-01-18 at the 355:Expression vectors 228:expression vectors 223:restriction enzyme 211: 115:expression vectors 105:(in this case the 1274:Molecular biology 1197:978-0-471-45329-1 1136:BMC Biotechnology 1049:978-0-495-31714-2 981:978-1-4614-6436-5 937:978-1-4051-8173-0 922:Brown TA (2010). 843:978-0-7637-0489-6 804:meshb.nlm.nih.gov 742:978-1-118-31369-5 605:Expression vector 569:polyhistidine-tag 559:periplasmic space 350:Expression vector 221:" where multiple 92:selectable marker 88:multicloning site 28:molecular cloning 1286: 1256: 1255: 1247: 1201: 1172: 1171: 1161: 1151: 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356: 351: 341: 339: 334: 332: 328: 327:dexamethasone 324: 318: 316: 312: 308: 307:Transcription 302:Transcription 299: 297: 293: 289: 283: 273: 271: 267: 263: 258: 257:Viral vectors 253: 246:Viral vectors 243: 241: 237: 233: 229: 224: 220: 216: 208: 204: 199: 192: 189: 188: 187: 185: 184: 179: 178: 173: 169: 164: 149: 147: 143: 138: 136: 132: 128: 123: 120: 116: 112: 108: 104: 100: 95: 93: 89: 85: 81: 77: 73: 72:viral vectors 69: 65: 61: 57: 56:be replicated 53: 49: 45: 44:Lambda phages 41: 37: 33: 29: 22: 1187: 1139: 1135: 1125: 1080: 1076: 1066: 1039: 1033: 1003:(5): 62–68. 1000: 996: 990: 963: 957: 946:. Retrieved 927: 917: 874: 870: 860: 831: 823: 812:. Retrieved 803: 794: 761: 757: 751: 731: 724: 713:. Retrieved 704: 694: 683:. Retrieved 674: 665: 595:Viral vector 561:of bacteria. 526: 514: 456: 429:exonucleases 419: 396:Tac-Promoter 392:Trp promoter 381: 353: 337: 335: 330: 319: 305: 285: 266:retroviruses 255: 252:Viral vector 212: 181: 175: 166: 146:transfection 139: 130: 126: 124: 96: 31: 25: 359:translation 294:(BACs), or 240:stop codons 1268:Categories 948:2016-11-07 814:2018-04-16 715:2018-04-11 685:2022-04-16 675:Genome.gov 657:References 615:Minicircle 551:luciferase 495:Antibiotic 344:Expression 331:Drosophila 1058:123008833 891:1092-2172 625:Naked DNA 543:reporters 523:galactose 107:transgene 60:expressed 1233:Archived 1216:Archived 1168:15967027 1117:25170953 1077:PLOS ONE 942:Archived 852:45730915 808:Archived 786:23559881 778:24509783 709:Archived 679:Archived 671:"Vector" 584:See also 545:include 535:analogue 483:ligation 468:Promoter 453:Features 446:ribosome 434:Minimal 386:and the 338:in vitro 315:operator 290:(YACs), 168:Plasmids 157:Plasmids 119:promoter 90:, and a 68:plasmids 36:plasmids 1258:Biology 1159:1181807 1108:4149579 1085:Bibcode 1040:Biology 1025:3317814 1005:Bibcode 909:9618448 590:Plasmid 505:Epitope 361:of the 131:E. coli 127:E. coli 76:cosmids 58:and/or 40:cosmids 1244:Portal 1194:  1166:  1156:  1142:: 19. 1115:  1105:  1056:  1046:  1023:  978:  934:  907:  897:  889:  850:  840:  784:  776:  739:  575:, and 527:lacZ-α 515:lacZ-α 384:operon 317:used. 203:pBR322 103:insert 78:, and 32:vector 21:Vector 900:98921 782:S2CID 539:X-gal 311:mRNAs 236:start 1192:ISBN 1164:PMID 1113:PMID 1054:OCLC 1044:ISBN 1021:PMID 976:ISBN 932:ISBN 905:PMID 887:ISSN 848:OCLC 838:ISBN 774:PMID 737:ISBN 549:and 394:and 363:mRNA 238:and 201:The 86:, a 52:cell 30:, a 1154:PMC 1144:doi 1103:PMC 1093:doi 1013:doi 1001:257 968:doi 895:PMC 879:doi 766:doi 436:UTR 382:lac 99:DNA 26:In 1270:: 1162:. 1152:. 1138:. 1134:. 1111:. 1101:. 1091:. 1079:. 1075:. 1052:. 1019:. 1011:. 999:. 974:. 940:. 926:. 903:. 893:. 885:. 875:62 873:. 869:. 846:. 806:. 802:. 780:. 772:. 762:12 760:. 703:. 677:. 673:. 571:, 388:T7 242:. 234:, 94:. 74:, 70:, 42:, 38:, 1246:: 1200:. 1170:. 1146:: 1140:5 1119:. 1095:: 1087:: 1081:9 1060:. 1027:. 1015:: 1007:: 984:. 970:: 951:. 911:. 881:: 854:. 817:. 788:. 768:: 745:. 718:. 688:. 553:. 485:. 209:. 23:.

Index

Vector
molecular cloning
plasmids
cosmids
Lambda phages
nucleic sequence
cell
be replicated
expressed
recombinant DNA
plasmids
viral vectors
cosmids
artificial chromosomes
origin of replication
multicloning site
selectable marker
DNA
insert
transgene
cloning vectors
expression vectors
promoter
shuttle vectors
transformation
transfection
Plasmid vector
Plasmids
origin of replication
Escherichia coli

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