125:(PID) is a free biomedical database of human cellular signaling pathways. The database contains information about the molecular interactions and reactions that take place in cells, with a particular focus on processes that might be relevant to cancer research and treatment. The database was established as collaboration between the U.S.
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The NCI-Nature curated data is gathered from published research literature and reviewed by expert scientists before publication. Evidence codes are assigned to each molecular interaction, which allows users to evaluate the reliability of the interactions or to search for interactions identified by
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The database content can be viewed in self-contained, pre-defined pathways. The database can also dynamically generate interaction networks to visualize the results of database searches. Pathways and dynamically generated networks are displayed in GIF and SVG images and can be downloaded as
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As of
November 2007, the database contained 59 pathways (comprising 3309 molecular interactions) curated by the NCI-Nature editorial team. New pathways are added each month. The database also contains 254 pathways (comprising 3003 interactions) imported from the June 2004 edition of the
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in 2005 and was launched in
November 2006. In September 2012, active curation was stopped and the PID data are now available in the
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Schaefer, Carl F; Anthony Kira; Krupa Shiva; Buchoff
Jeffrey; Day Matthew; Hannay Timo; Buetow Kenneth H (Jan 2009).
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Identification of Key
Processes Underlying Cancer Phenotypes Using Biologic Pathway Analysis
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Literature-curated human signaling network, the largest human signaling network database
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An
Introduction to the NCI-Nature Pathway Interaction Database
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239:10.1093/nar/gkn653
154:pathway database.
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227:Nucleic Acids Res
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36:Description
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185:Reactome
179:See also
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110:Website
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Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.
