Knowledge

Anders Krogh

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Introduction to the Theory of Neural Computation (Santa Fe Institute Studies in the Sciences of Complexity). (1991) John A. Hertz, Richard G. Palmer, Anders Krogh, Westview Press
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Krogh A, Larsson B, von Heijne G, Sonnhammer EL (2001). "Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes".
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Krogh A, Brown M, Mian IS, Sjölander K, Haussler D (1994). "Hidden Markov models in computational biology. Applications to protein modeling".
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Lindgreen S, Gardner PP, Krogh A (2007). "MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing".
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Lindgreen S, Gardner PP, Krogh A (2006). "Measuring covariation in RNA alignments: physical realism improves information measures".
156:), and is co-author of a widely used textbook in bioinformatics. In addition, he also co-authored one of the early textbooks on 1246: 1167:"February 13, 2017: The International Society for Computational Biology Names Seven Members as the ISCB Fellows Class of 2017" 1996: 537:"JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update" 388: 1497: 1219: 211: 1166: 1548: 227:
Professor Anders Krogh, The Bioinformatics Centre, Department of Molecuar Biology, University of Copenhagen
1808: 1721: 1945: 1864: 1731: 380: 323:"Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology" 1254: 1093: 1027: 832: 774: 664: 636: 472: 1783: 1338: 141: 101: 39: 1205: 1991: 1884: 1726: 1400: 659: 985:"An evolutionary method for learning HMM structure: prediction of protein secondary structure" 1232: 422:"Asap: A Framework for Over-Representation Statistics for Transcription Factor Binding Sites" 790:"A hidden Markov model approach for determining expression from genomic tiling micro arrays" 1533: 1120: 1054: 941: 597: 433: 149: 59: 8: 1904: 1528: 374: 1201: 1124: 1058: 945: 601: 586:"Intragenomic Matching Reveals a Huge Potential for miRNA-Mediated Regulation in Plants" 437: 1762: 1757: 1538: 1143: 1108: 1077: 1042: 1011: 984: 965: 931: 816: 789: 758: 731: 620: 585: 561: 536: 512: 487: 456: 421: 161: 339: 322: 298: 273: 1818: 1778: 1701: 1574: 1425: 1379: 1364: 1148: 1082: 1016: 957: 904: 869: 821: 763: 712: 677: 625: 566: 517: 461: 394: 384: 362: 344: 303: 254: 173: 864: 847: 708: 673: 1935: 1894: 1696: 1675: 1599: 1410: 1348: 1307: 1138: 1128: 1072: 1062: 1006: 996: 949: 896: 859: 811: 801: 753: 743: 704: 669: 615: 605: 556: 548: 507: 499: 451: 441: 334: 293: 285: 246: 1107:
Boomsma W, Mardia KV, Taylor CC, Ferkinghoff-Borg J, Krogh A, Hamelryck T (2008).
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Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids
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Frith MC, Valen E, Krogh A, Hayashizaki Y, Carninci P, Sandelin A (2008).
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Marstrand TT, Frellsen J, Moltke I, et al. (2008). Copley R (ed.).
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Winther O, Krogh A (2004). "Teaching computers to fold proteins".
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Fellows of the International Society for Computational Biology
1109:"A generative, probabilistic model of local protein structure" 732:"Automatic generation of gene finders for eukaryotic species" 787: 488:"A code for transcription initiation in mammalian genomes" 485: 584:
Lindow M, Jacobsen A, Nygaard S, Mang Y, Krogh A (2007).
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Won KJ, Hamelryck T, Prügel-Bennett A, Krogh A (2007).
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Sjölander K, Karplus K, Brown M, et al. (1996).
148:. He is known for his pioneering work on the use of 1040: 788:Munch K, Gardner PP, Arctander P, Krogh A (2006). 1159: 271: 1983: 535:Bryne JC, Valen E, Tang MH, et al. (2008). 1260:International Society for Computational Biology 181:International Society for Computational Biology 1240: 880: 1100: 1034: 976: 921: 915: 845: 839: 781: 723: 688: 643: 577: 528: 479: 413: 212:"User:Krogh - BINF - Bioinformatics Centre" 179:In 2017, Krogh was elected a Fellow of the 1247: 1233: 729: 314: 265: 230: 1142: 1132: 1076: 1066: 1010: 1000: 935: 863: 815: 805: 757: 747: 663: 619: 609: 560: 511: 455: 445: 338: 297: 160:. His current research interests include 1984: 1041:Hamelryck T, Kent JT, Krogh A (2006). 1228: 1220:Home page at University of Copenhagen 379:(1st ed.), Cambridge, New York: 272:Krogh A, Mian IS, Haussler D (1994). 13: 144:, where he leads the university's 14: 2013: 1187: 152:in bioinformatics (together with 1194: 1092: 1026: 831: 773: 635: 471: 340:10.1093/bioinformatics/12.4.327 404: 355: 204: 1: 865:10.1093/bioinformatics/bti701 709:10.1093/bioinformatics/btl514 674:10.1093/bioinformatics/btm525 198: 1068:10.1371/journal.pcbi.0020131 611:10.1371/journal.pcbi.0030238 447:10.1371/journal.pone.0001623 373:; Mitchison, Graeme (1998), 174:protein structure prediction 7: 846:Nielsen P, Krogh A (2005). 186: 10: 2018: 954:10.1103/PhysRevE.70.030903 547:(Database issue): D102–6. 381:Cambridge University Press 1913: 1842: 1771: 1740: 1689: 1638: 1562: 1511: 1475: 1434: 1388: 1357: 1316: 1270: 730:Munch K, Krogh A (2006). 111: 107: 97: 87: 80: 69: 55: 45: 35: 25: 18: 1997:Danish bioinformaticians 142:University of Copenhagen 102:University of Copenhagen 40:University of Copenhagen 1134:10.1073/pnas.0801715105 1002:10.1186/1471-2105-8-357 807:10.1186/1471-2105-7-239 749:10.1186/1471-2105-7-263 901:10.1006/jmbi.2000.4315 290:10.1093/nar/22.22.4768 251:10.1006/jmbi.1994.1104 146:bioinformatics center 327:Comput. Appl. Biosci 150:hidden Markov models 60:hidden Markov models 1905:Gustavo Stolovitzky 1529:Julio Collado-Vides 1125:2008PNAS..105.8932B 1059:2006PLSCB...2..131H 946:2004PhRvE..70c0903W 602:2007PLSCB...3..238L 438:2008PLoSO...3.1623M 1971:Reinhard Schneider 1763:Marie-France Sagot 1758:Xiaole Shirley Liu 1204:has a profile for 989:BMC Bioinformatics 794:BMC Bioinformatics 736:BMC Bioinformatics 553:10.1093/nar/gkm955 504:10.1101/gr.6831208 363:Durbin, Richard M. 1979: 1978: 1885:Núria López Bigas 1819:Katherine Pollard 1779:Serafim Batzoglou 1702:Terry Gaasterland 1426:Gunnar von Heijne 1365:Michael Ashburner 1210: 1119:(26): 8932–8937. 1047:PLOS Comput. Biol 590:PLOS Comput. Biol 541:Nucleic Acids Res 278:Nucleic Acids Res 162:promoter analysis 131: 130: 82:Scientific career 2009: 1936:Takashi Gojobori 1895:Teresa Przytycka 1875:Christina Leslie 1697:Patricia Babbitt 1676:Olga Troyanskaya 1600:Christine Orengo 1498:Robert Gentleman 1349:Alfonso Valencia 1308:Michael Waterman 1264:year of election 1249: 1242: 1235: 1226: 1225: 1208: 1198: 1197: 1182: 1181: 1179: 1177: 1163: 1157: 1156: 1146: 1136: 1104: 1098: 1097: 1096: 1090: 1080: 1070: 1038: 1032: 1031: 1030: 1024: 1014: 1004: 980: 974: 973: 939: 937:cond-mat/0309497 919: 913: 912: 884: 878: 877: 867: 843: 837: 836: 835: 829: 819: 809: 785: 779: 778: 777: 771: 761: 751: 727: 721: 720: 692: 686: 685: 667: 647: 641: 640: 639: 633: 623: 613: 581: 575: 574: 564: 532: 526: 525: 515: 483: 477: 476: 475: 469: 459: 449: 417: 411: 408: 402: 401: 359: 353: 352: 342: 318: 312: 311: 301: 269: 263: 262: 234: 228: 226: 224: 223: 214:. 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Retrieved 216:the original 206: 178: 134:Anders Krogh 133: 132: 98:Institutions 81: 20:Anders Krogh 1946:David Jones 1941:Trey Ideker 1824:Ben Raphael 1804:Osamu Gotoh 1799:Paul Flicek 1712:Yves Moreau 1590:Janet Kelso 1585:Barry Honig 1539:Des Higgins 1503:Andrej Šali 1488:Ewan Birney 1370:Phil Bourne 1344:Gary Stormo 1324:Russ Altman 1288:Webb Miller 1176:13 February 1053:(9): e131. 498:(1): 1–12. 74:ISCB Fellow 26:Nationality 1986:Categories 1890:Dana Pe'er 1850:Atul Butte 1732:Mike Steel 1727:Mona Singh 1605:Aviv Regev 1416:Ron Shamir 1401:Peter Karp 1209:(Q4753847) 889:J Mol Biol 492:Genome Res 222:2011-04-14 199:References 46:Occupation 1966:Mihai Pop 1926:Sean Eddy 660:CiteSeerX 399:593254083 50:Professor 1153:18579771 1087:17002495 1021:17888163 962:15524499 909:11152613 874:16249266 826:16672042 768:16712739 717:17038338 682:18006551 630:18052543 571:18006571 522:18032727 466:18286180 426:PLOS ONE 187:See also 183:(ISCB). 1956:Jun Liu 1880:Ming Li 1258:of the 1256:Fellows 1202:Scholia 1144:2440424 1121:Bibcode 1078:1570370 1055:Bibcode 1012:2072961 995:: 357. 942:Bibcode 817:1481622 800:: 239. 759:1522026 742:: 263. 621:2098865 598:Bibcode 562:2238834 513:2134772 457:2229843 434:Bibcode 349:8902360 308:7984429 259:8107089 140:at the 112:Website 1151:  1141:  1085:  1075:  1019:  1009:  970:103560 968:  960:  907:  872:  824:  814:  766:  756:  715:  680:  662:  628:  618:  569:  559:  520:  510:  464:  454:  397:  387:  347:  306:  299:308529 296:  257:  193:ELIXIR 125:/krogh 117:people 88:Fields 76:(2017) 70:Awards 30:Danish 966:S2CID 932:arXiv 136:is a 119:.binf 1914:2022 1843:2021 1772:2020 1741:2019 1690:2018 1639:2017 1563:2016 1512:2015 1476:2014 1435:2013 1389:2012 1358:2011 1317:2010 1271:2009 1178:2017 1149:PMID 1113:PNAS 1083:PMID 1017:PMID 958:PMID 905:PMID 870:PMID 822:PMID 764:PMID 713:PMID 678:PMID 626:PMID 567:PMID 518:PMID 462:PMID 395:OCLC 385:ISBN 345:PMID 304:PMID 255:PMID 172:and 1262:by 1139:PMC 1129:doi 1117:105 1073:PMC 1063:doi 1007:PMC 997:doi 950:doi 897:doi 893:305 860:doi 812:PMC 802:doi 754:PMC 744:doi 705:doi 670:doi 616:PMC 606:doi 557:PMC 549:doi 508:PMC 500:doi 452:PMC 442:doi 335:doi 294:PMC 286:doi 247:doi 243:235 123:.dk 121:.ku 1988:: 1169:. 1147:. 1137:. 1127:. 1115:. 1111:. 1081:. 1071:. 1061:. 1049:. 1045:. 1015:. 1005:. 991:. 987:. 964:. 956:. 948:. 940:. 928:70 926:. 903:. 891:. 868:. 856:21 854:. 850:. 820:. 810:. 796:. 792:. 762:. 752:. 738:. 734:. 711:. 701:22 699:. 676:. 668:. 656:23 654:. 624:. 614:. 604:. 592:. 588:. 565:. 555:. 545:36 543:. 539:. 516:. 506:. 496:18 494:. 490:. 460:. 450:. 440:. 428:. 424:. 393:, 383:, 369:; 365:; 343:. 331:12 329:. 325:. 302:. 292:. 282:22 280:. 276:. 253:. 241:. 176:. 168:, 164:, 62:, 1248:e 1241:t 1234:v 1213:. 1180:. 1155:. 1131:: 1123:: 1089:. 1065:: 1057:: 1051:2 1023:. 999:: 993:8 972:. 952:: 944:: 934:: 911:. 899:: 876:. 862:: 828:. 804:: 798:7 770:. 746:: 740:7 719:. 707:: 684:. 672:: 632:. 608:: 600:: 594:3 573:. 551:: 524:. 502:: 468:. 444:: 436:: 430:3 351:. 337:: 310:. 288:: 261:. 249:: 225:.

Index

Danish
University of Copenhagen
Professor
hidden Markov models
neural networks
ISCB Fellow
Bioinformatics
University of Copenhagen
people.binf.ku.dk/krogh
bioinformatician
University of Copenhagen
bioinformatics center
hidden Markov models
David Haussler
neural networks
promoter analysis
non-coding RNA
gene prediction
protein structure prediction
International Society for Computational Biology
ELIXIR
"User:Krogh - BINF - Bioinformatics Centre"
the original
doi
10.1006/jmbi.1994.1104
PMID
8107089
"A hidden Markov model that finds genes in E. coli DNA"
doi
10.1093/nar/22.22.4768

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