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Quantitative trait locus

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Cheverud, James M.; Churchill, Gary A.; Cook, Melloni; Crabbe, John C.; Crusio, Wim E.; Darvasi, Ariel; de Haan, Gerald; Demant, Peter; Doerge, R. W.; Elliott, Rosemary W.; Farber, Charles R.; Flaherty, Lorraine; Flint, Jonathan; Gershenfeld, Howard; Gibson, John P.; Gu, Jing; Gu, Weikuan; Himmelbauer, Heinz; Hitzemann, Robert; Hsu, Hui-Chen; Hunter, Kent; Iraqi, Fuad A.; Jansen, Ritsert C.; Johnson, Thomas E.; Jones, Byron C.; Kempermann, Gerd; Lammert, Frank; Lu, Lu; Manly, Kenneth F.; Matthews, Douglas B.; Medrano, Juan F.; Mehrabian, Margarete; Mittleman, Guy; Mock, Beverly A.; Mogil, Jeffrey S.; Montagutelli, Xavier; Morahan, Grant; Mountz, John D.; Nagase, Hiroki; Nowakowski, Richard S.; O'Hara, Bruce F.; Osadchuk, Alexander V.; Paigen, Beverly; Palmer, Abraham A.; Peirce, Jeremy L.; Pomp, Daniel; Rosemann, Michael; Rosen, Glenn D.; Schalkwyk, Leonard C.; Seltzer, Ze'ev; Settle, Stephen; Shimomura, Kazuhiro; Shou, Siming; Sikela, James M.; Siracusa, Linda D.; Spearow, Jimmy L.; Teuscher, Cory; Threadgill, David W.; Toth, Linda A.; Toye, Ayo A.; Vadasz, Csaba; Van Zant, Gary; Wakeland, Edward; Williams, Robert W.; Zhang, Huang-Ge; Zou, Fei (2003).
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lab and that show Mendelian inheritance patterns reflect a large deviation from the wild type, and Castle believed that acquisition of such features is the basis of "discontinuous variation" that characterizes speciation. Darwin discussed the inheritance of similar mutant features but did not invoke them as a requirement of speciation. Instead Darwin used the emergence of such features in breeding populations as evidence that mutation can occur at random within breeding populations, which is a central premise of his model of selection in nature. Later in his career, Castle would refine his model for speciation to allow for small variation to contribute to speciation over time. He also was able to demonstrate this point by selectively breeding laboratory populations of rats to obtain a hooded phenotype over several generations.
196:, a graduate student who trained under Castle, summarized contemporary thinking about the genetic basis of quantitative natural variation: "As genetic studies continued, ever smaller differences were found to mendelize, and any character, sufficiently investigated, turned out to be affected by many factors." Wright and others formalized population genetics theory that had been worked out over the preceding 30 years explaining how such traits can be inherited and create stably breeding populations with unique characteristics. Quantitative trait genetics today leverages Wright's observations about the statistical relationship between genotype and phenotype in families and populations to understand how certain genetic features can affect variation in natural and derived populations. 431: 448: 564:
located elsewhere on the genome can have an interfering effect. As a consequence, the power of detection may be compromised, and the estimates of locations and effects of QTLs may be biased (Lander and Botstein 1989; Knapp 1991). Even nonexisting so-called "ghost" QTLs may appear (Haley and Knott 1992; Martinez and Curnow 1992). Therefore, multiple QTLs could be mapped more efficiently and more accurately by using multiple QTL models. One popular approach to handle QTL mapping where multiple QTL contribute to a trait is to iteratively scan the genome and add known QTL to the regression model as QTLs are identified. This method, termed
599:), involves multiple families instead of a single family. Family-based QTL mapping has been the only way for mapping of genes where experimental crosses are difficult to make. However, due to some advantages, now plant geneticists are attempting to incorporate some of the methods pioneered in human genetics. Using family-pedigree based approach has been discussed (Bink et al. 2008). Family-based linkage and association has been successfully implemented (Rosyara et al. 2009) 578:
suitable marker loci to serve as covariates; once these have been chosen, CIM turns the model selection problem into a single-dimensional scan. The choice of marker covariates has not been solved, however. Not surprisingly, the appropriate markers are those closest to the true QTLs, and so if one could find these, the QTL mapping problem would be complete anyway.
522:. The ANOVA approach for QTL mapping has three important weaknesses. First, we do not receive separate estimates of QTL location and QTL effect. QTL location is indicated only by looking at which markers give the greatest differences between genotype group averages, and the apparent QTL effect at a marker will be smaller than the true QTL effect as a result of 427:
differences in expression between them? Generally, what makes the two individuals different are likely to be environmental factors. Due to the involved nature of genetic investigations needed to determine such inheritance patterns, this is not usually the first avenue of investigation one would choose to determine etiology.
336:, this binomial distribution will begin to resemble a normal distribution. From this viewpoint, a disease state will become apparent at one of the tails of the distribution, past some threshold value. Disease states of increasing severity will be expected the further one goes past the threshold and away from the 167:
himself observed that inbred features of fancy pigeons were inherited in accordance with Mendel's laws (although Darwin did not actually know about Mendel's ideas when he made the observation), it was not obvious that these features selected by fancy pigeon breeders can similarly explain quantitative
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Another interest of statistical geneticists using QTL mapping is to determine the complexity of the genetic architecture underlying a phenotypic trait. For example, they may be interested in knowing whether a phenotype is shaped by many independent loci, or by a few loci, and do those loci interact.
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In this method, one performs interval mapping using a subset of marker loci as covariates. These markers serve as proxies for other QTLs to increase the resolution of interval mapping, by accounting for linked QTLs and reducing the residual variation. The key problem with CIM concerns the choice of
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The principle for QTL mapping is: 1) The likelihood can be calculated for a given set of parameters (particularly QTL effect and QTL position) given the observed data on phenotypes and marker genotypes. 2) The estimates for the parameters are those where the likelihood is highest. 3) A significance
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to unify the laws of Mendelian inheritance with Darwin's theory of speciation invoked the idea that species become distinct from one another as one species or the other acquires a novel Mendelian factor. Castle's conclusion was based on the observation that novel traits that could be studied in the
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If multifactorial inheritance is indeed the case, then the chance of the patient contracting the disease is reduced only if cousins and more distant relatives have the disease. It must be stated that while multifactorially-inherited diseases tend to run in families, inheritance will not follow the
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If it is shown that the brothers and sisters of the patient have the disease, then there is a strong chance that the disease is genetic and that the patient will also be a genetic carrier. This is not quite enough as it also needs to be proven that the pattern of inheritance is non-Mendelian. This
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A mutation resulting in a disease state is often recessive, so both alleles must be mutant in order for the disease to be expressed phenotypically. A disease or syndrome may also be the result of the expression of mutant alleles at more than one locus. When more than one gene is involved, with or
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The paradigm of polygenic inheritance as being used to define multifactorial disease has encountered much disagreement. Turnpenny (2004) discusses how simple polygenic inheritance cannot explain some diseases such as the onset of Type I diabetes mellitus, and that in cases such as these, not all
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in organisms, especially human organisms such as: height, skin color, and body mass. All of these phenotypes are complicated by a great deal of give-and-take between genes and environmental effects. The continuous distribution of traits such as height and skin color described above, reflects the
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Complex Trait Consortium β€”; Abiola, Oduola; Angel, Joe M.; Avner, Philip; Bachmanov, Alexander A.; Belknap, John K.; Bennett, Beth; Blankenhorn, Elizabeth P.; Blizard, David A.; Bolivar, Valerie; Brockmann, Gudrun A.; Buck, Kari J.; Bureau, Jean-Francois; Casley, William L.; Chesler, Elissa J.;
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Conventional methods for the detection of quantitative trait loci (QTLs) are based on a comparison of single QTL models with a model assuming no QTL. For instance in the "interval mapping" method the likelihood for a single putative QTL is assessed at each location on the genome. However, QTLs
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For organisms whose genomes are known, one might now try to exclude genes in the identified region whose function is known with some certainty not to be connected with the trait in question. If the genome is not available, it may be an option to sequence the identified region and determine the
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If a genetic cause is suspected and little else is known about the illness, then it remains to be seen exactly how many genes are involved in the phenotypic expression of the disease. Once that is determined, the question must be answered: if two people have the required genes, why are there
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The assumption of polygenic inheritance is that all involved loci make an equal contribution to the symptoms of the disease. This should result in a normal (Gaussian) distribution of genotypes. When it does not, the idea of polygenetic inheritance cannot be supported for that illness.
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The term 'interval mapping' is used for estimating the position of a QTL within two markers (often indicated as 'marker-bracket'). Interval mapping is originally based on the maximum likelihood but there are also very good approximations possible with simple regression.
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Lander and Botstein developed interval mapping, which overcomes the three disadvantages of analysis of variance at marker loci. Interval mapping is currently the most popular approach for QTL mapping in experimental crosses. The method makes use of a
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between the marker and the QTL. Second, we must discard individuals whose genotypes are missing at the marker. Third, when the markers are widely spaced, the QTL may be quite far from all markers, and so the power for QTL detection will decrease.
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Castle's was perhaps the first attempt made in the scientific literature to direct evolution by artificial selection of a trait with continuous underlying variation, however the practice had previously been widely employed in the development of
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Castle's work was among the first to attempt to unify the recently rediscovered laws of Mendelian inheritance with Darwin's theory of evolution. Still, it would be almost thirty years until the theoretical framework for evolution of
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determine both the location and effects size of QTL more accurately than single-QTL approaches, especially in small mapping populations where the effect of correlation between genotypes in the mapping population may be problematic.
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Rosyara U.R., J.L. Gonzalez-Hernandez, K.D. Glover, K.R. Gedye and J.M. Stein. 2009. Family-based mapping of quantitative trait loci in plant breeding populations with resistance to Fusarium head blight in wheat as an illustration
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action of genes that do not manifest typical patterns of dominance and recessiveness. Instead the contributions of each involved locus are thought to be additive. Writers have distinguished this kind of inheritance as
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underlying a trait. The DNA sequence of any genes in this region can then be compared to a database of DNA for genes whose function is already known, this task being fundamental for marker-assisted crop improvement.
124:(those traits which vary continuously, e.g. height) as opposed to discrete traits (traits that have two or several character values, e.g. red hair in humans, a recessive trait, or smooth vs. wrinkled peas used by 1293:
Daware, Anurag; Parida, Swarup K.; Tyagi, Akhilesh K. (2020), Vaschetto, Luis M. (ed.), "Integrated Genomic Strategies for Cereal Genetic Enhancement: Combining QTL and Association Mapping",
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Daware, Anurag; Parida, Swarup K.; Tyagi, Akhilesh K. (2020), Vaschetto, Luis M. (ed.), "Integrated Genomic Strategies for Cereal Genetic Enhancement: Combining QTL and Association Mapping",
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variation. Several genes factor into determining a person's natural skin color, so modifying only one of those genes can change skin color slightly or in some cases, such as for
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of the typed markers, and, like analysis of variance, assumes the presence of a single QTL. In interval mapping, each locus is considered one at a time and the logarithm of the
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groups. For other types of crosses (such as the intercross), where there are more than two possible genotypes, one uses a more general form of ANOVA, which provides a so-called
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Multifactorially inherited diseases are said to constitute the majority of genetic disorders affecting humans which will result in hospitalization or special care of some kind.
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would require studying dozens, even hundreds of different family pedigrees before a conclusion of multifactorial inheritance is drawn. This often takes several years.
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Traits controlled both by the environment and by genetic factors are called multifactorial. Usually, multifactorial traits outside of illness result in what we see as
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Rosyara, U. R.; Maxson-stein, K.L.; Glover, K.D.; Stein, J.M.; Gonzalez-hernandez, J.L. (2007). "Family-based mapping of FHB resistance QTLs in hexaploid wheat".
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to obtain livestock or plants with favorable features from populations that show quantitative variation in traits like body size or grain yield.
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The above are well-known examples of diseases having both genetic and environmental components. Other examples involve atopic diseases such as
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Bink MCAM, Boer MP, ter Braak CJF, Jansen J, Voorrips RE, van de Weg WE: Bayesian analysis of complex traits in pedigreed plant populations.
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trait is usually determined by many genes. Consequently, many QTLs are associated with a single trait. Another use of QTLs is to identify
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distribution. This shows that multifactorial inheritance is polygenic, and genetic frequencies can be predicted by way of a polyhybrid
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putative functions of genes by their similarity to genes with known function, usually in other genomes. This can be done using
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of a trait. It may indicate that plant height is controlled by many genes of small effect, or by a few genes of large effect.
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have been found beneficial to identify the gene responsible by a cross-validation of genes within the interacting loci with
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Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. ES Lander and D Botstein. Genetics. 1989
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Garnier, Sophie, Truong, Vinh, Genome-Wide Haplotype Analysis of Cis Expression Quantitative Trait Loci in Monocytes
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without the presence of environmental triggers, we say that the disease is the result of multifactorial inheritance.
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cross. Phenotypic frequencies are a different matter, especially if they are complicated by environmental factors.
1771: 1828: 549: 510:, sometimes called "marker regression") at the marker loci. In this method, in a backcross, one may calculate a 160: 159:. For early geneticists, it was not immediately clear that the smooth variation in traits like body size (i.e., 1997: 1864: 63: 430: 304:. Polygenic inheritance can be explained as Mendelian inheritance at many loci, resulting in a trait which is 1992: 1982: 1087: 891: 268:
and numerous others. Most phenotypic characteristics are the result of the interaction of multiple genes.
237:(discrete categories). Instead, their phenotypes typically vary along a continuous gradient depicted by a 1977: 1487:
Lynch, M. & Walsh, B. Genetics and Analysis of Quantitative Traits edn 1 (Sinauer Associates, 1998).
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Jannink, J; Bink, Mc; Jansen, Rc (August 2001). "Using complex plant pedigrees to map valuable genes".
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Thus, due to the nature of polygenic traits, inheritance will not follow the same pattern as a simple
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In a recent development, classical QTL analyses were combined with gene expression profiling i.e. by
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would be widely formalized. In an early summary of the theory of evolution of continuous variation,
1634:"Inclusive Composite Interval Mapping of QTL by Environment Interactions in Biparental Populations" 1209: 614: 592: 548:) is calculated for the model that the given locus is a true QTL. The odds ratio is related to the 700: 155:'s ideas spread, geneticists began to connect Mendel's rules of inheritance of single factors to 1842: 1246: 634: 209: 1181: 1151: 763: 1891: 1851: 1823: 751: 552:
between the phenotype and the marker genotype for each individual in the experimental cross.
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refers to polygenic inheritance that also includes interactions with the environment. Unlike
205: 172: 148: 1392:"Systematic identification of trans eQTLs as putative drivers of known disease associations" 1951: 1910: 1645: 1520: 943: 624: 114: 1793: 70:) correlate with an observed trait. This is often an early step in identifying the actual 8: 1941: 1808: 609: 596: 357: 305: 238: 156: 55: 17: 1649: 1524: 947: 1676: 1633: 1602: 1541: 1510: 1498: 1465: 1440: 1416: 1391: 1367: 1342: 1324: 1063: 1011: 967: 865: 811: 786: 768: 739: 726: 695: 121: 98: 47: 1712: 1116: 1724: 1716: 1681: 1663: 1607: 1574: 1546: 1470: 1421: 1372: 1354: 1328: 1316: 1306: 1068: 1016: 959: 907: 869: 857: 847: 816: 772: 731: 491: 486:-controlling elements for the expression of often disease-associated genes. Observed 385: 971: 743: 1708: 1671: 1653: 1597: 1589: 1536: 1528: 1460: 1452: 1411: 1403: 1362: 1298: 1058: 1050: 1006: 998: 951: 839: 806: 798: 721: 713: 709: 416: 337: 297: 253: 245: 113:. The number of QTLs which explain variation in the phenotypic trait indicates the 39: 1856: 1441:"Mapping mendelian factors underlying quantitative traits using RFLP linkage maps" 1658: 1593: 1496: 1456: 230: 1302: 1002: 843: 802: 1920: 1054: 955: 471: 420: 301: 189: 164: 136: 1765: 1142:
Birth Defects Genetics Centre, University of South Dakota School of Medicine.
696:"The nature and identification of quantitative trait loci: a community's view" 1971: 1720: 1667: 1497:
Bloom J. S.; Ehrenreich I. M.; Loo W. T.; Lite T.-L. V.; Kruglyak L. (2013).
1358: 1297:, Methods in Molecular Biology, vol. 2072, Springer US, pp. 15–25, 838:, Methods in Molecular Biology, vol. 2072, Springer US, pp. 15–25, 787:"Map-Based Cloning of the Gene Associated With the Soybean Maturity Locus E3" 407:, no characteristic genetic markers have been determined with any certainty. 404: 400: 381: 193: 152: 125: 1905: 1728: 1685: 1550: 1425: 1376: 1320: 1268: 1072: 1020: 986: 963: 861: 820: 735: 519: 483: 452: 435: 389: 1611: 1474: 1038: 692: 785:
Watanabe, Satoshi; Hideshima, Rumiko; Xia, Zhengjun; et al. (2009).
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A list of computer programs for genetic analysis including QTL analysis
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The more genes involved in the cross, the more the distribution of the
987:"Variation in the Hooded Pattern of Rats, and a New Allele of Hooded" 619: 584:(ICIM) has also been proposed as a potential method for QTL mapping. 545: 487: 218: 132: 95: 51: 1407: 931: 717: 163:) was caused by the inheritance of single genetic factors. Although 1956: 1946: 1887: 1837: 1798: 1787: 644: 515: 467:
This can provide information on how the phenotype may be evolving.
353: 343: 265: 102: 59: 1515: 1117:"Human Genetics for 1st Year Students: Multifactorial Inheritance" 62:. QTLs are mapped by identifying which molecular markers (such as 249: 109:, and their environment. These QTLs are often found on different 1803: 1150:. University of South Dakota School of Medicine. Archived from 1148:
Clinical Genetics: A Self-Study Guide for Health Care Providers
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The simplest method for QTL mapping is analysis of variance (
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is the number of involved loci, then the coefficients of the
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Li, Shanshan; Wang, Jiankang; Zhang, Luyan (10 July 2015).
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characteristic (trait) that is attributable to two or more
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DNA locus associated with variation in a quantitative trait
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was rediscovered at the beginning of the 20th century. As
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Proud, Virginia & Roberts, Helen (31 December 2005).
91: 43: 101:, which varies in degree and which can be attributed to 1809:
A Statistical Framework for Quantitative Trait Mapping
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threshold can be established by permutation testing.
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is widely believed to be multifactorially genetic by
1137: 1135: 1133: 784: 1886: 572: 275: 1744:Proceedings of National Fusarium Head Blight Forum 925: 923: 1292: 1130: 833: 368:genes are thought to make an equal contribution. 324:) will give the frequency of distribution of all 1969: 882: 880: 878: 595:, or Family-pedigree based mapping (Linkage and 587: 344:Heritable disease and multifactorial inheritance 920: 1438: 1243:"Medical Genetics: Multifactorial Inheritance" 1032: 1030: 1872: 875: 686: 233:, polygenic traits do not follow patterns of 1794:Precision Mapping of Quantitative Trait Loci 1783:Plant Breeding and Genomics on eXtension.org 1340: 1203: 1201: 1199: 1735: 1692: 1631: 1341:Grisel, Judith E.; Crabbe, John C. 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(2013). 1383: 1334: 1286: 1261: 1037:Wright, Sewall (1 March 1931). 550:Pearson correlation coefficient 1092:, McGraw-Hill Higher Education 1079: 978: 827: 778: 663: 442: 13: 1: 1713:10.1016/S1360-1385(01)02017-9 1075:– via www.genetics.org. 1023:– via www.genetics.org. 656: 588:Family-pedigree based mapping 77: 1659:10.1371/journal.pone.0132414 1144:"Multifactorial Inheritance" 985:Castle, W. E. (1 May 1951). 7: 1759:Euphytica 2008, 161:85–96. 1303:10.1007/978-1-4939-9865-4_3 844:10.1007/978-1-4939-9865-4_3 803:10.1534/genetics.108.098772 670:Miles, C; Wayne, M (2008). 602: 375: 217:refers to inheritance of a 10: 2014: 1594:10.1093/genetics/135.1.205 1457:10.1093/genetics/121.1.185 956:10.1126/science.18.456.396 932:"Mendel's Law of Heredity" 640:Nested association mapping 566:composite interval mapping 438:on the human chromosome 20 282:continuous characteristics 227:Multifactorial inheritance 203: 143: 1934: 1926:Effective population size 1898: 1219:(12th ed.). Elsevier 1208:Turnpenny, Peter (2004). 1003:10.1093/genetics/36.3.254 415:same pattern as a simple 256:are polygenic, including 1916:Quantitative trait locus 1804:Complex Trait Consortium 1055:10.1093/genetics/16.2.97 615:Family-based QTL mapping 593:Family-based QTL mapping 291:quantitative inheritance 84:quantitative trait locus 32:quantitative trait locus 1988:Quantitative trait loci 1701:Trends in Plant Science 701:Nature Reviews Genetics 476:expression QTLs (eQTLs) 1273:blast.ncbi.nlm.nih.gov 650:Genetic susceptibility 635:Genetic predisposition 455: 439: 210:Oligogenic inheritance 1998:Quantitative genetics 1892:Quantitative genetics 1852:University of Warwick 1089:Multifactorial Traits 496:scientific literature 450: 433: 235:Mendelian inheritance 215:Polygenic inheritance 206:Monogenic inheritance 173:William Ernest Castle 168:variation in nature. 149:Mendelian inheritance 128:in his experiments). 1993:Genetic epidemiology 1983:Statistical genetics 1952:Evolutionary biology 1824:QTL discussion forum 1086:Ricki Lewis (2003), 625:Dominance (genetics) 502:Analysis of variance 306:normally-distributed 171:An early attempt by 161:incomplete dominance 115:genetic architecture 1942:Population genetics 1650:2015PLoSO..1032414L 1533:10.1038/nature11867 1525:2013Natur.494..234B 1184:on 17 December 2013 1154:on 30 December 2006 948:1903Sci....18..396C 610:Association mapping 597:association mapping 358:normal, or Gaussian 200:Quantitative traits 157:Darwinian evolution 131:Moreover, a single 1978:Classical genetics 1249:on 15 October 2006 930:Castle WE (1903). 762:has generic name ( 456: 440: 392:(open spine), and 314:binomial expansion 254:genetic components 48:quantitative trait 1965: 1964: 1509:(7436): 234–237. 1402:(10): 1238–1243. 894:on 3 October 2013 492:metabolic pathway 488:epistatic effects 90:) is a region of 16:(Redirected from 2005: 1881: 1874: 1867: 1858: 1857: 1799:QTL Cartographer 1748: 1747: 1739: 1733: 1732: 1696: 1690: 1689: 1679: 1661: 1629: 1623: 1622: 1620: 1618: 1605: 1579: 1570: 1564: 1561: 1555: 1554: 1544: 1518: 1494: 1488: 1485: 1479: 1478: 1468: 1436: 1430: 1429: 1419: 1387: 1381: 1380: 1370: 1338: 1332: 1331: 1290: 1284: 1283: 1281: 1279: 1265: 1259: 1258: 1256: 1254: 1238: 1229: 1228: 1226: 1224: 1214: 1205: 1194: 1193: 1191: 1189: 1170: 1164: 1163: 1161: 1159: 1139: 1128: 1127: 1125: 1123: 1115:Tissot, Robert. 1112: 1095: 1093: 1083: 1077: 1076: 1066: 1034: 1025: 1024: 1014: 982: 976: 975: 942:(456): 396–406. 927: 918: 917: 911: 903: 901: 899: 890:. Archived from 884: 873: 872: 831: 825: 824: 814: 797:(4): 1251–1262. 782: 776: 767: 761: 757: 755: 747: 729: 710:Nature Portfolio 690: 684: 683: 676:Nature Education 667: 531:Interval mapping 405:biopsychiatrists 356:will resemble a 246:human skin color 231:monogenic traits 21: 2013: 2012: 2008: 2007: 2006: 2004: 2003: 2002: 1968: 1967: 1966: 1961: 1930: 1894: 1885: 1779: 1752: 1751: 1740: 1736: 1697: 1693: 1644:(7): e0132414. 1630: 1626: 1616: 1614: 1577: 1571: 1567: 1562: 1558: 1495: 1491: 1486: 1482: 1437: 1433: 1408:10.1038/ng.2756 1388: 1384: 1339: 1335: 1313: 1291: 1287: 1277: 1275: 1267: 1266: 1262: 1252: 1250: 1239: 1232: 1222: 1220: 1212: 1206: 1197: 1187: 1185: 1172: 1171: 1167: 1157: 1155: 1140: 1131: 1121: 1119: 1113: 1098: 1084: 1080: 1035: 1028: 983: 979: 928: 921: 905: 904: 897: 895: 888:"Archived copy" 886: 885: 876: 854: 832: 828: 783: 779: 759: 758: 749: 748: 718:10.1038/nrg1206 691: 687: 668: 664: 659: 654: 605: 590: 575: 533: 504: 472:DNA microarrays 445: 378: 346: 278: 271: 212: 202: 146: 137:candidate genes 80: 28: 23: 22: 15: 12: 11: 5: 2011: 2001: 2000: 1995: 1990: 1985: 1980: 1963: 1962: 1960: 1959: 1954: 1949: 1944: 1938: 1936: 1935:Related Topics 1932: 1931: 1929: 1928: 1923: 1921:Candidate gene 1918: 1913: 1908: 1902: 1900: 1896: 1895: 1884: 1883: 1876: 1869: 1861: 1855: 1854: 1845: 1840: 1831: 1826: 1821: 1816: 1811: 1806: 1801: 1796: 1791: 1785: 1778: 1777:External links 1775: 1774: 1773: 1768: 1757: 1756: 1750: 1749: 1734: 1691: 1624: 1588:(1): 205–211. 1565: 1556: 1489: 1480: 1451:(1): 185–199. 1431: 1382: 1353:(3): 220–227. 1333: 1311: 1285: 1260: 1230: 1195: 1165: 1129: 1096: 1078: 1026: 997:(3): 254–266. 977: 919: 874: 852: 826: 777: 685: 661: 660: 658: 655: 653: 652: 647: 642: 637: 632: 627: 622: 617: 612: 606: 604: 601: 589: 586: 574: 571: 532: 529: 503: 500: 444: 441: 421:dihybrid cross 396:(open skull). 377: 374: 345: 342: 302:dihybrid cross 277: 274: 201: 198: 190:complex traits 145: 142: 79: 76: 26: 9: 6: 4: 3: 2: 2010: 1999: 1996: 1994: 1991: 1989: 1986: 1984: 1981: 1979: 1976: 1975: 1973: 1958: 1955: 1953: 1950: 1948: 1945: 1943: 1940: 1939: 1937: 1933: 1927: 1924: 1922: 1919: 1917: 1914: 1912: 1909: 1907: 1904: 1903: 1901: 1897: 1893: 1889: 1882: 1877: 1875: 1870: 1868: 1863: 1862: 1859: 1853: 1849: 1846: 1844: 1841: 1839: 1835: 1832: 1830: 1827: 1825: 1822: 1820: 1817: 1815: 1812: 1810: 1807: 1805: 1802: 1800: 1797: 1795: 1792: 1789: 1786: 1784: 1781: 1780: 1772: 1769: 1767: 1762: 1761: 1760: 1754: 1753: 1745: 1738: 1730: 1726: 1722: 1718: 1714: 1710: 1707:(8): 337–42. 1706: 1702: 1695: 1687: 1683: 1678: 1673: 1669: 1665: 1660: 1655: 1651: 1647: 1643: 1639: 1635: 1628: 1613: 1609: 1604: 1599: 1595: 1591: 1587: 1583: 1576: 1569: 1560: 1552: 1548: 1543: 1538: 1534: 1530: 1526: 1522: 1517: 1512: 1508: 1504: 1500: 1493: 1484: 1476: 1472: 1467: 1462: 1458: 1454: 1450: 1446: 1442: 1435: 1427: 1423: 1418: 1413: 1409: 1405: 1401: 1397: 1393: 1386: 1378: 1374: 1369: 1364: 1360: 1356: 1352: 1348: 1344: 1337: 1330: 1326: 1322: 1318: 1314: 1312:9781493998654 1308: 1304: 1300: 1296: 1289: 1274: 1270: 1264: 1248: 1244: 1237: 1235: 1218: 1211: 1204: 1202: 1200: 1183: 1179: 1175: 1169: 1153: 1149: 1145: 1138: 1136: 1134: 1118: 1111: 1109: 1107: 1105: 1103: 1101: 1091: 1090: 1082: 1074: 1070: 1065: 1060: 1056: 1052: 1049:(2): 97–159. 1048: 1044: 1040: 1033: 1031: 1022: 1018: 1013: 1008: 1004: 1000: 996: 992: 988: 981: 973: 969: 965: 961: 957: 953: 949: 945: 941: 937: 933: 926: 924: 915: 909: 893: 889: 883: 881: 879: 871: 867: 863: 859: 855: 853:9781493998654 849: 845: 841: 837: 830: 822: 818: 813: 808: 804: 800: 796: 792: 788: 781: 774: 770: 765: 760:|last13= 753: 745: 741: 737: 733: 728: 723: 719: 715: 711: 707: 703: 702: 697: 689: 681: 677: 673: 666: 662: 651: 648: 646: 643: 641: 638: 636: 633: 631: 628: 626: 623: 621: 618: 616: 613: 611: 608: 607: 600: 598: 594: 585: 583: 579: 570: 567: 561: 557: 553: 551: 547: 543: 539: 528: 525: 524:recombination 521: 517: 513: 509: 499: 497: 493: 489: 485: 481: 477: 473: 468: 464: 462: 454: 449: 437: 432: 428: 424: 422: 418: 412: 408: 406: 402: 401:schizophrenia 397: 395: 391: 387: 383: 373: 369: 365: 363: 359: 355: 350: 341: 339: 335: 331: 327: 323: 319: 315: 311: 307: 303: 299: 294: 292: 288: 283: 273: 269: 267: 263: 259: 255: 251: 247: 242: 240: 236: 232: 228: 224: 220: 216: 211: 207: 197: 195: 194:Sewall Wright 191: 185: 183: 177: 174: 169: 166: 162: 158: 154: 150: 141: 138: 134: 129: 127: 123: 118: 116: 112: 108: 104: 100: 97: 93: 89: 85: 75: 73: 69: 65: 61: 57: 53: 49: 45: 41: 37: 33: 19: 1915: 1906:Heritability 1758: 1743: 1737: 1704: 1700: 1694: 1641: 1637: 1627: 1615:. 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Retrieved 892:the original 835: 829: 794: 790: 780: 752:cite journal 705: 699: 688: 679: 675: 665: 591: 580: 576: 562: 558: 554: 534: 505: 469: 465: 457: 453:osteoporosis 436:osteoporosis 425: 413: 409: 398: 390:spina bifida 379: 370: 366: 351: 347: 333: 330:combinations 325: 321: 317: 309: 295: 290: 286: 281: 279: 270: 243: 226: 214: 213: 186: 178: 170: 147: 130: 119: 87: 83: 81: 42:(section of 35: 31: 29: 1814:GeneNetwork 1278:18 February 1210:"Chapter 9" 712:: 911–916. 538:genetic map 520:F-statistic 512:t-statistic 498:databases. 443:QTL mapping 394:anencephaly 182:agriculture 111:chromosomes 1972:Categories 657:References 542:odds ratio 434:A QTL for 417:monohybrid 386:dermatitis 298:monohybrid 239:bell curve 219:phenotypic 204:See also: 133:phenotypic 96:phenotypic 78:Definition 56:population 1911:Dominance 1721:1360-1385 1668:1932-6203 1516:1208.2865 1396:Nat Genet 1359:0090-838X 1329:202711099 1253:6 January 1223:6 January 1188:6 January 1158:6 January 1122:6 January 870:202711099 773:195367115 620:Epistasis 546:LOD score 478:describe 362:Mendelian 354:genotypes 287:polygenic 103:polygenic 60:organisms 52:phenotype 1957:Heredity 1947:Genomics 1888:Genetics 1838:Scitable 1788:INTERSNP 1729:11495765 1686:26161656 1638:PLOS ONE 1582:Genetics 1551:23376951 1445:Genetics 1426:24013639 1377:31798043 1321:31541435 1073:17246615 1043:Genetics 1021:14840647 991:Genetics 972:11670642 964:17752783 908:cite web 862:31541435 821:19474204 791:Genetics 744:27285742 736:14634638 645:Oncogene 603:See also 516:genotype 376:Examples 266:diabetes 1819:GridQTL 1677:4498613 1646:Bibcode 1617:1 March 1612:8224820 1603:1205619 1542:4001867 1521:Bibcode 1475:2563713 1466:1203601 1417:3991562 1368:6875759 1064:1201091 1012:1209518 944:Bibcode 936:Science 812:2728863 727:2063446 474:. 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If 289:, or 223:genes 107:genes 99:trait 72:genes 68:AFLPs 54:of a 40:locus 1725:PMID 1717:ISSN 1682:PMID 1664:ISSN 1619:2023 1608:PMID 1547:PMID 1471:PMID 1422:PMID 1373:PMID 1355:ISSN 1317:PMID 1307:ISBN 1280:2018 1255:2007 1225:2007 1190:2007 1160:2007 1124:2007 1069:PMID 1017:PMID 960:PMID 914:link 900:2013 858:PMID 848:ISBN 817:PMID 764:help 732:PMID 682:(1). 338:mean 316:of ( 208:and 64:SNPs 1709:doi 1672:PMC 1654:doi 1598:PMC 1590:doi 1586:135 1537:PMC 1529:doi 1507:494 1461:PMC 1453:doi 1449:121 1412:PMC 1404:doi 1363:PMC 1299:doi 1059:PMC 1051:doi 1007:PMC 999:doi 952:doi 840:doi 807:PMC 799:doi 795:182 722:PMC 714:doi 480:cis 419:or 384:or 300:or 92:DNA 88:QTL 66:or 58:of 44:DNA 36:QTL 18:QTL 1974:: 1890:: 1850:– 1836:@ 1723:. 1715:. 1703:. 1680:. 1670:. 1662:. 1652:. 1642:10 1640:. 1636:. 1606:. 1596:. 1584:. 1580:. 1545:. 1535:. 1527:. 1519:. 1505:. 1501:. 1469:. 1459:. 1447:. 1443:. 1420:. 1410:. 1400:45 1398:. 1394:. 1371:. 1361:. 1351:19 1349:. 1345:. 1323:, 1315:, 1305:, 1271:. 1233:^ 1215:. 1198:^ 1176:. 1146:. 1132:^ 1099:^ 1067:. 1057:. 1047:16 1045:. 1041:. 1029:^ 1015:. 1005:. 995:36 993:. 989:. 966:. 958:. 950:. 940:18 938:. 934:. 922:^ 910:}} 906:{{ 877:^ 864:, 856:, 846:, 815:. 805:. 793:. 789:. 756:: 754:}} 750:{{ 738:. 730:. 720:. 704:. 698:. 678:. 674:. 423:. 388:, 340:. 320:+ 293:. 264:, 260:, 241:. 82:A 30:A 1880:e 1873:t 1866:v 1746:. 1731:. 1711:: 1705:6 1688:. 1656:: 1648:: 1621:. 1592:: 1553:. 1531:: 1523:: 1513:: 1477:. 1455:: 1428:. 1406:: 1379:. 1301:: 1282:. 1257:. 1227:. 1192:. 1162:. 1126:. 1094:. 1053:: 1001:: 974:. 954:: 946:: 916:) 902:. 842:: 823:. 801:: 775:. 766:) 746:. 716:: 706:4 680:1 544:( 334:n 326:n 322:b 318:a 310:n 86:( 34:( 20:)

Index

QTL
locus
DNA
quantitative trait
phenotype
population
organisms
SNPs
AFLPs
genes
DNA
phenotypic
trait
polygenic
genes
chromosomes
genetic architecture
traits
Mendel
phenotypic
candidate genes
Mendelian inheritance
Mendel
Darwinian evolution
incomplete dominance
Darwin
William Ernest Castle
agriculture
complex traits
Sewall Wright

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