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Including this template will automatically result in the addition of relevant categories based on the properties of the gene. These include
Category:Human proteins and categories that correspond to the chromosome where the gene is located, such as Category:Genes on human chromosome 19. Other
147:
to the top of a gene page. The infobox is populated via the
Wikidata item of the page it resides on. To view which Wikidata item is linked to a page, follow the "Wikidata items" link from the "Tools" menu to the left of the article.
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Any page can display the infobox even if it does not have a gene or protein interwiki link. The
Wikidata item must be explicitly added as a parameter and the underlying module is invoked. For instance, appending
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to the top of a protein page. The infobox is populated by using the
Wikidata item of the protein to find the encoded gene item and then uses the gene item to populate the infobox.
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Data structure of gene and protein data in
Wikidata is a bit complex. Even if there is only one gene/protein article in Knowledge, there are many data pages in Wikidata.
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Basically
Wikidata has distinct pages for gene and protein each, for respective species (See the table below). And pages are interconnected based on following rules.
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Gene and protein pages are interconnected through "encodes (d:P:P688)" and "encoded by (d:P:P702)" property claims (horizontal arrows "โ", "โ" in the table).
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Gene pages from different species are interconnected through "ortholog (d:P:P684)" property claims (vertical arrows "โ", "โ" in the table).
1685:
Huss, Jon W; Orozco, Camilo; Goodale, James; Wu, Chunlei; Batalov, Serge; Vickers, Tim J; Valafar, Faramarz; Su, Andrew I (8 July 2008).
187:"An Error has occurred retrieving Wikidata item for infobox" Indicates a non gene/protein Wikidata item or an incomplete Wikidata item.
179:. QID is the Wikidata gene item used to populate the infobox. Substitute the wikidata item id (QID) of interest as the QID parameter.
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HHG1, HLP3, HPE3, MCOPCB5, SMMCI, TPT, TPTPS, sonic hedgehog, Sonic hedgehog, ShhNC, sonic hedgehog signaling molecule
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The followings are list of data which are used in this template. Showing data example and data location in the case of
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The data which infobox_gene shows to readers are collected from somewhere of this interconnected
Wikidata pages.
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This is the
Infobox gene template. The data in the infobox is sourced from Wikidata. The
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categories added manually to the article apart from the template will work as usual.
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1663:- Enormous biomedical data in Wikidata are mostly posted and maintained by this bot
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and changes may be widely noticed. Test changes in the template's
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Knowledge articles are connected to
Wikidata's gene data page (
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In some cases, Knowledge article page is connected to Human
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In most cases, Knowledge article page is connected to Human
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to the top of any page will create an infobox for the gene
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1687:"A Gene Wiki for Community Annotation of Gene Function"
173:{{#invoke:Infobox_gene|getTemplateData|QID=Q414043}}
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129:implementation of this template is located at
1746:Editors can experiment in this template's
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1806:Templates based on the Infobox Lua module
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159:{{infobox gene}}
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1801:Infobox templates using Wikidata
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1638:Template:Infobox protein family
208:Basic network structure of the
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1209:โข glycosaminoglycan binding
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30:Infobox Gene documentation
1780:Subpages of this template
1731:Template:Infobox gene/doc
1217:โข endopeptidase activity
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1648:Template:GNF Protein box
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18:Template:GNF Protein box
1796:Human protein templates
1633:Template:Infobox enzyme
631:Mouse protein data page
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344:Human protein data page
152:Usage on a protein page
1774:Add categories to the
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1197:โข calcium ion binding
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1661:d:User:ProteinBoxBot
1503:Cytogenetic location
1213:โข hydrolase activity
1211:โข morphogen activity
1203:โข peptidase activity
603:Mouse gene data page
514:Human gene data page
387:Mouse gene data page
316:Human gene data page
166:Usage on other pages
137:Usage on a gene page
101:This template uses
1667:Knowledge:Gene Wiki
1477:Chromosome category
1207:โข laminin-1 binding
1199:โข metal ion binding
131:Module:Infobox gene
110:Module:Infobox gene
1591:Strand orientation
1403:human chromosome 7
1205:โข zinc ion binding
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1622:Similar templates
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1451:Chromosome length
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1215:โข protein binding
1201:โข patched binding
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79:user subpage
63:
1727:transcluded
1697:(7): e175.
1562:Genomic end
835:gene symbol
636:d:Q14331165
608:d:Q14331135
547:d:Q13561329
420:d:Q14860215
392:d:Q14860079
321:d:Q14860072
45:] [
41:] [
37:] [
1790:Categories
1721:The above
1570:155604967
1541:155592680
1459:159345973
1393:Chromosome
1299:Protein ID
1076:HomoloGene
1057:MGI:98297
651:ortholog (
614:โencodes (
580:ortholog (
525:โencodes (
505:(Article)
435:ortholog (
398:โencodes (
364:ortholog (
349:d:Q2477760
327:โencodes (
285:(Protein)
231:) through
191:Categories
75:/testcases
1778:subpage.
1763:testcases
1308:NP_000184
1262:NR_132319
1258:NR_132318
1250:NM_000193
988:EC number
774:Gene name
768:Q14860215
763:Q14860079
753:Q14860072
708:property
545:Reelin (
519:d:Q414043
503:Knowledge
498:(Protein)
271:(Article)
269:Knowledge
83:talk page
1713:18613750
1655:See also
758:Q2477760
706:Wikidata
653:d:P:P684
634:Reelin (
624:d:P:P702
616:d:P:P688
582:d:P:P684
535:d:P:P702
527:d:P:P688
496:Wikidata
489:Wikidata
437:d:P:P684
408:d:P:P702
400:d:P:P688
366:d:P:P684
337:d:P:P702
329:d:P:P688
283:Wikidata
276:Wikidata
71:/sandbox
1755:|
1748:sandbox
1741:history
1739:|
1512:7q36.3
1343:Ensembl
1028:600725
966:Q15465
956:UniProt
926:Gene ID
924:Ensembl
864:Gene ID
807:Aliases
803:Aliases
745:Protein
731:Protein
475:protein
229:#Case B
225:#Case A
114:sandbox
43:history
1772:pages.
1711:
1679:BioGPS
1297:RefSeq
1241:RNA ID
1239:RefSeq
1086:30961
862:Entrez
717:Other
606:Reln (
599:Mouse
570:Reelin
517:RELN (
510:Human
491:(Gene)
479:Reelin
469:Case B
290:Human
278:(Gene)
249:Case A
1729:from
1595:P2548
1508:P4196
1455:P2043
1429:P1813
1398:P1057
893:Image
872:6469
778:Label
747:Page
743:Mouse
740:Page
736:Mouse
733:Page
729:Human
726:Page
722:Human
703:Data
657:โใใใโ
649:โใใใโ
586:โใใใโ
578:โใใใโ
441:โใใใโ
433:โใใใโ
390:Shh (
379:Mouse
370:โใใใโ
362:โใใใโ
319:SHH (
49:]
47:purge
33:[
1776:/doc
1768:edit
1761:and
1757:diff
1753:edit
1737:edit
1709:PMID
1566:P645
1537:P644
1481:P910
1349:P704
1303:P637
1245:P639
1193:P682
1189:P681
1185:P680
1153:P692
1127:3MXW
1123:3M1N
1119:3HO5
1114:P638
1082:P593
1053:P671
1024:P492
1018:OMIM
993:P591
962:P352
930:P594
868:P351
843:SHH
839:P353
833:HGNC
782:SHH
738:Gene
724:Gene
255:gene
177:RELN
156:Add
141:Add
39:edit
35:view
1725:is
1699:doi
1108:PDB
1047:MGI
897:P18
127:Lua
103:Lua
73:or
1792::
1733:.
1707:.
1693:.
1689:.
1433:7
1110:id
1078:ID
1049:ID
1020:ID
958:ID
697:.
638:)
626:)โ
618:)โ
610:)
562:โ
549:)
537:)โ
529:)โ
521:)
481:.
462:โฎ
422:)
410:)โ
402:)โ
394:)
351:)
339:)โ
331:)โ
323:)
312:โ
261:.
133:.
105::
1782:.
1770:)
1766:(
1759:)
1751:(
1743:)
1735:(
1715:.
1701::
1695:6
1610:โ
1603:โ
1581:โ
1574:โ
1552:โ
1545:โ
1523:โ
1516:โ
1496:โ
1471:โ
1445:โ
1415:โ
1408:โ
1382:โ
1375:โ
1334:โ
1327:โ
1286:โ
1279:โ
1230:โ
1223:โ
1165:โ
1141:โ
1134:โ
1097:โ
1090:โ
1065:โ
1032:โ
1009:โ
1002:โ
979:โ
972:โ
945:โ
938:โ
909:โ
883:โ
876:โ
847:โ
822:โ
815:โ
793:โ
786:โ
678:โฎ
673:โฎ
670:โฎ
655:)
584:)
558:โ
556:โ
552:โ
457:โฎ
450:โฎ
439:)
368:)
308:โ
306:โ
302:โ
116:)
112:(
20:)
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