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Trithorax-group proteins

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This page contains useful information on Polycomb and trithorax proteins, in the form of an introduction, links to published reviews, list of Polycomb and trithorax proteins, illustrative power point slides and a link to a genome browser showing the genome-wide distribution of these proteins in
335:. The actions of TrxG proteins are often described as 'antagonistic' of PcG proteins function. Aside from gene regulation, evidence suggests TrxG proteins are also involved in other processes including 295:
Trithorax-group proteins typically function in large complexes formed with other proteins. The complexes formed by TrxG proteins are divided into two groups: histone-modifying complexes and
363:. As of 2011 it is unclear whether TrxG activity is required in every cell during the entire development of an organism or only during certain stages in certain cell types. 319:) at specific sites in chromatin recognized by the complex. Ash1 domain is involved in H3K36 methylation. Trithorax complex also interacts with 871:
Schuettengruber B, Martinez AM, Iovino N, Cavalli G (December 2011). "Trithorax group proteins: switching genes on and keeping them active".
958: 824:"The Trithorax group protein Ash2l and Saf-A are recruited to the inactive X chromosome at the onset of stable X inactivation" 554:
Grimaud C, Nègre N, Cavalli G (2006). "From genetics to epigenetics: the tale of Polycomb group and trithorax group genes".
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Ingham PW (1998). "trithorax and the regulation of homeotic gene expression in Drosophila: a historical perspective".
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marks, specifically H3K4me3, established by maternally-supplied factors. TrxG proteins are also implicated in
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Bagchi A, Papazoglu C, Wu Y, Capurso D, Brodt M, Francis D, Bredel M, Vogel H, Mills AA (February 2007).
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The table contains names of Drosophila TrxG members. Homologs in other species may have different names.
599:"E2F1 mediates DNA damage and apoptosis through HCF-1 and the MLL family of histone methyltransferases" 392: 387: 377: 356: 65:
as part of his doctoral thesis while a graduate student in the laboratory of J.R.S. Whittle at the
303:(PcG) proteins, is regulating gene expression. Whereas PcG proteins are typically associated with 648:"Polycomb Repressive Complex 2 and Trithorax modulate Drosophila longevity and stress resistance" 300: 787:
Soshnikova N (August 2011). "Dynamics of Polycomb and Trithorax activities during development".
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During development, TrxG proteins maintain activation of required genes, particularly the
299:-dependent chromatin-remodeling complexes. The main function of TrxG proteins, along with 8: 927:
The Polycomb and Trithorax page of the Cavalli lab at IGH (Institut de Génétique Humaine)
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Schuettengruber B, Chourrout D, Vervoort M, Leblanc B, Cavalli G (February 2007).
30:. They can be categorized into three general classes based on molecular function: 308: 27: 496: 723: 706: 523: 442: 425: 304: 61:
The founding member of TrxG proteins, trithorax (trx), was discovered ~1978 by
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Siebold AP, Banerjee R, Tie F, Kiss DL, Moskowitz J, Harte PJ (January 2010).
567: 351:, after maternal factors are depleted. This is accomplished by preserving the 26:) are a heterogeneous collection of proteins whose main action is to maintain 942: 532: 402: 360: 62: 822:
Pullirsch D, Härtel R, Kishimoto H, Leeb M, Steiner G, Wutz A (March 2010).
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plus other TrxG proteins not categorized in the first three classes.
884: 870: 323:(CREB binding protein) which is an acetyltransferase to acetylate 372: 316: 311:. The trithorax complex activates gene transcription by inducing 34: 789:
Birth Defects Research Part A: Clinical and Molecular Teratology
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Ubiquitously transcribed tetratricopeptide repeat, X chromosome
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The Interactive Fly – Society for Developmental Biology
645: 426:"Genome regulation by polycomb and trithorax proteins" 419: 417: 553: 414: 940: 495:Geisler, Sarah J.; Paro, Renato (2015-09-01). 16:Type of proteins that maintain gene expression 463: 461: 864: 815: 786: 307:, TrxG proteins are most commonly linked to 780: 745: 739: 698: 639: 590: 547: 494: 707:"CHD5 is a tumor suppressor at human 1p36" 458: 892: 847: 763: 748:"Maintenance of gene expression patterns" 722: 681: 671: 622: 596: 522: 512: 467: 441: 327:. This gene activation is reinforced by 941: 342: 81:Members of Trithorax Group Proteins: 13: 746:Brock HW, Fisher CL (March 2005). 238:Nucleosome remodeling factor-38kD 102:absent, small or homeotic discs 2 94:absent, small or homeotic discs 1 14: 970: 920: 597:Tyagi S, Herr W (October 2009). 339:, cancer, and stress responses. 225:mod(mdg4), E(var)3-93D, or doom 126:Brahma associated protein 60 kD 118:Brahma associated protein 55kD 488: 1: 959:Drosophila melanogaster genes 408: 77:is the human homolog of trx. 652:Proc. Natl. Acad. Sci. U.S.A 359:, which occurs during early 174:female sterile (1) homeotic 56: 7: 366: 315:of lysine 4 of histone H3 ( 290: 10: 975: 724:10.1016/j.cell.2006.11.052 443:10.1016/j.cell.2007.02.009 894:21.11116/0000-0006-0774-0 568:10.1007/s10577-006-1069-y 393:Histone-Modifying Enzymes 388:Histone methyltransferase 378:Histone acetyltransferase 357:X-chromosome inactivation 930:Drosophila melanogaster. 873:Nat. Rev. Mol. Cell Biol 37:-modifying TrxG proteins 20:Trithorax-group proteins 673:10.1073/pnas.0907739107 615:10.1038/emboj.2009.258 206:little imaginal discs 158:enhancer of yellow 3 150:Enhancer of bithorax 75:-methyltransferase 2A 949:DNA-binding proteins 383:Histone deacetylases 67:University of Sussex 41:chromatin-remodeling 664:2010PNAS..107..169S 524:20.500.11850/104579 343:Role in development 82: 954:Molecular genetics 840:10.1242/dev.035956 801:10.1002/bdra.20774 765:10.1002/dvdy.20298 514:10.1242/dev.120030 222:modifier of mdg 4 80: 507:(17): 2876–2887. 470:Int. J. Dev. Biol 285: 284: 966: 915: 914: 896: 868: 862: 861: 851: 819: 813: 812: 784: 778: 777: 767: 743: 737: 736: 726: 702: 696: 695: 685: 675: 643: 637: 636: 626: 594: 588: 587: 551: 545: 544: 526: 516: 492: 486: 485: 465: 456: 455: 445: 421: 83: 79: 974: 973: 969: 968: 967: 965: 964: 963: 939: 938: 923: 918: 885:10.1038/nrm3230 879:(12): 799–814. 869: 865: 820: 816: 785: 781: 744: 740: 703: 699: 644: 640: 609:(20): 3185–95. 595: 591: 552: 548: 493: 489: 466: 459: 422: 415: 411: 369: 345: 309:gene activation 293: 254:Trithorax like 71:Histone-lysine 59: 28:gene expression 17: 12: 11: 5: 972: 962: 961: 956: 951: 937: 936: 931: 922: 921:External links 919: 917: 916: 863: 814: 779: 738: 697: 638: 589: 556:Chromosome Res 546: 487: 457: 412: 410: 407: 406: 405: 400: 395: 390: 385: 380: 375: 368: 365: 344: 341: 313:trimethylation 305:gene silencing 301:polycomb group 292: 289: 283: 282: 279: 275: 274: 271: 267: 266: 263: 259: 258: 255: 251: 250: 247: 243: 242: 239: 235: 234: 231: 227: 226: 223: 219: 218: 215: 211: 210: 207: 203: 202: 199: 195: 194: 191: 190:Imitation SWI 187: 186: 183: 179: 178: 175: 171: 170: 167: 163: 162: 161:SAYP or e(y)3 159: 155: 154: 151: 147: 146: 143: 139: 138: 135: 131: 130: 127: 123: 122: 119: 115: 114: 111: 107: 106: 103: 99: 98: 95: 91: 90: 87: 58: 55: 51: 50: 49:TrxG proteins, 44: 38: 15: 9: 6: 4: 3: 2: 971: 960: 957: 955: 952: 950: 947: 946: 944: 935: 932: 928: 925: 924: 912: 908: 904: 900: 895: 890: 886: 882: 878: 874: 867: 859: 855: 850: 845: 841: 837: 834:(6): 935–43. 833: 829: 825: 818: 810: 806: 802: 798: 794: 790: 783: 775: 771: 766: 761: 758:(3): 633–55. 757: 753: 749: 742: 734: 730: 725: 720: 717:(3): 459–75. 716: 712: 708: 701: 693: 689: 684: 679: 674: 669: 665: 661: 658:(1): 169–74. 657: 653: 649: 642: 634: 630: 625: 620: 616: 612: 608: 604: 600: 593: 585: 581: 577: 573: 569: 565: 562:(4): 363–75. 561: 557: 550: 542: 538: 534: 530: 525: 520: 515: 510: 506: 502: 498: 491: 483: 479: 475: 471: 464: 462: 453: 449: 444: 439: 436:(4): 735–45. 435: 431: 427: 420: 418: 413: 404: 403:PRMT4 pathway 401: 399: 396: 394: 391: 389: 386: 384: 381: 379: 376: 374: 371: 370: 364: 362: 361:embryogenesis 358: 354: 350: 340: 338: 334: 330: 326: 322: 318: 314: 310: 306: 302: 298: 288: 280: 277: 276: 272: 269: 268: 264: 261: 260: 256: 253: 252: 248: 245: 244: 240: 237: 236: 232: 229: 228: 224: 221: 220: 216: 213: 212: 208: 205: 204: 200: 197: 196: 192: 189: 188: 184: 181: 180: 176: 173: 172: 168: 165: 164: 160: 157: 156: 152: 149: 148: 144: 141: 140: 136: 133: 132: 128: 125: 124: 120: 117: 116: 112: 109: 108: 104: 101: 100: 96: 93: 92: 88: 85: 84: 78: 76: 74: 68: 64: 63:Philip Ingham 54: 48: 45: 43:TrxG proteins 42: 39: 36: 33: 32: 31: 29: 25: 21: 876: 872: 866: 831: 827: 817: 795:(8): 781–7. 792: 788: 782: 755: 751: 741: 714: 710: 700: 655: 651: 641: 606: 602: 592: 559: 555: 549: 504: 500: 490: 476:(3): 423–9. 473: 469: 433: 429: 346: 294: 286: 72: 60: 52: 23: 19: 18: 828:Development 501:Development 329:acetylation 169:eld or osa 47:DNA-binding 943:Categories 409:References 398:Nucleosome 353:epigenetic 333:histone H4 270:verthandi 246:trithorax 214:lola like 89:Symbol(s) 533:0950-1991 349:Hox genes 337:apoptosis 57:Discovery 911:19992445 903:22108599 858:20150277 809:21290568 774:15704101 752:Dev. Dyn 733:17289567 692:20018689 633:19763085 584:19504262 576:16821133 541:26329598 452:17320510 367:See also 291:Function 849:2834461 683:2806727 660:Bibcode 624:2771094 482:9654027 373:HIstome 317:H3K4me3 241:Nurf38 198:kismet 182:grappa 177:fs(1)h 166:eyelid 142:domino 110:brahma 35:histone 909:  901:  856:  846:  807:  772:  731:  690:  680:  631:  621:  603:EMBO J 582:  574:  539:  531:  480:  450:  278:zeste 230:moira 217:lolal 153:E(bx) 137:dalao 134:dalao 129:Bap60 121:Bap55 907:S2CID 580:S2CID 325:H3K27 193:Iswi 105:ash2 97:ash1 86:Name 899:PMID 854:PMID 805:PMID 770:PMID 729:PMID 711:Cell 688:PMID 629:PMID 572:PMID 537:PMID 529:ISSN 478:PMID 448:PMID 430:Cell 273:vtd 265:Utx 257:Trl 249:trx 233:mor 209:lid 201:kis 185:gpp 145:dom 113:brm 24:TrxG 889:hdl 881:doi 844:PMC 836:doi 832:137 797:doi 760:doi 756:232 719:doi 715:128 678:PMC 668:doi 656:107 619:PMC 611:doi 564:doi 519:hdl 509:doi 505:142 438:doi 434:128 331:of 321:CBP 297:ATP 945:: 905:. 897:. 887:. 877:12 875:. 852:. 842:. 830:. 826:. 803:. 793:91 791:. 768:. 754:. 750:. 727:. 713:. 709:. 686:. 676:. 666:. 654:. 650:. 627:. 617:. 607:28 605:. 601:. 578:. 570:. 560:14 558:. 535:. 527:. 517:. 503:. 499:. 474:42 472:. 460:^ 446:. 432:. 428:. 416:^ 281:z 69:. 913:. 891:: 883:: 860:. 838:: 811:. 799:: 776:. 762:: 735:. 721:: 694:. 670:: 662:: 635:. 613:: 586:. 566:: 543:. 521:: 511:: 484:. 454:. 440:: 73:N 22:(

Index

gene expression
histone
chromatin-remodeling
DNA-binding
Philip Ingham
University of Sussex
Histone-lysine N-methyltransferase 2A
ATP
polycomb group
gene silencing
gene activation
trimethylation
H3K4me3
CBP
H3K27
acetylation
histone H4
apoptosis
Hox genes
epigenetic
X-chromosome inactivation
embryogenesis
HIstome
Histone acetyltransferase
Histone deacetylases
Histone methyltransferase
Histone-Modifying Enzymes
Nucleosome
PRMT4 pathway

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