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DrugBank

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270:(absorption, distribution, metabolism, excretion and toxicity) parameters. Version 3.0 was released in 2011. This version contained 1424 approved small molecule drugs and 132 biotech drugs as well as >4000 unique drug targets. Version 3.0 also included drug transporter data, drug pathway data, drug pricing, patent and manufacturing data as well as data on >5000 experimental drugs. Version 4.0 was released in 2014. This version included 1558 FDA-approved small molecule drugs, 155 biotech drugs and 4200 unique drug targets. Version 4.0 also incorporated extensive information on drug metabolites (structures and reactions), drug taxonomy, drug spectra, drug 27: 1406:
Wishart, DS; Guo, AC; Eisner, R; Young, N; Gautam, B; Hau, DD; Psychogios, N; Dong, E; Bouatra, S; Mandal, R; Sinelnikov, I; Xia, J; Jia, L; Cruz, JA; Lim, E; Sobsey, CA; Shrivastava, S; Huang, P; Liu, P; Fang, L; Peng, J; Fradette, R; Cheng, D; Tzur, D; Clements, M; Lewis, A; De Souza, A; Zuniga, A;
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The DrugBank Online website is available to the public as a free-to-access resource. However, use and re-distribution of content from DrugBank Online or the underlying DrugBank Data, in whole or part, and for any purpose requires a license. Academic users can apply for a free license for certain use
257:
The first version of DrugBank was released in 2006. This early release contained relatively modest information about 841 FDA-approved small molecule drugs and 113 biotech drugs. It also included information on 2133 drug targets. The second version of DrugBank was released in 2009. This greatly
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Chemical structures, small molecule drugs, biotech drugs, drug targets, drug transporters, drug target sequences, drug target SNPs, drug metabolites, drug descriptions, disease associations, dosage data, food and drug interactions, adverse drug reactions, pharmacology, mechanisms of action, drug
218:/transporter/carrier) sequences are linked to these drug entries. Each DrugCard entry (Fig. 1) contains more than 200 data fields with half of the information being devoted to drug/chemical data and the other half devoted to drug target or protein data. 1143:
All data in DrugBank is derived from public non-proprietary sources. Nearly every data item is fully traceable and explicitly referenced to the original source. DrugBank data is available through a public web interface.
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resource, DrugBank combines detailed drug (i.e. chemical, pharmacological and pharmaceutical) data with comprehensive drug target (i.e. sequence, structure, and pathway) information. DrugBank has used content from
1357:
Law, V; Knox, C; Djoumbou, Y; Jewison, T; Guo, AC; Liu, Y; Maciejewski, A; Arndt, D; Wilson, M; Neveu, V; Tang, A; Gabriel, G; Ly, C; Adamjee, S; Dame, ZT; Han, B; Zhou, Y; Wishart, DS (Jan 2014).
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expanded and improved version of the database included 1344 approved small molecule drugs and 123 biotech drugs as well as 3037 unique drug targets. Version 2.0 also included, for the first time,
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metabolism, chemical synthesis, patent and pricing data, chemical properties, nomenclature, synonyms, chemical taxonomy, drug NMR spectra, drug GC-MS spectra, drug LC-MS spectra
1554:
Knox, C; Law, V; Jewison, T; Liu, P; Ly, S; Frolkis, A; Pon, A; Banco, K; Mak, C; Neveu, V; Djoumbou, Y; Eisner, R; Guo, AC; Wishart, DS. (Jan 2011).
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and drug synthesis information. Table 1 provides a more complete statistical summary of the history of DrugBank's development.
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databases. HMDB contains equivalent information on more than 40,000 human metabolites, T3DB contains information on 3100 common
1327: 1407:
Dawe, M; Xiong, Y; Clive, D; Greiner, R; Nazyrova, A; Shaykhutdinov, R; Li, L; Vogel, HJ; Forsythe, I (Jan 2009).
1667: 1662: 1672: 1193: 1173: 1657: 1163: 245:
and disease pathways, while FooDB contains equivalent information on ~28,000 food components and
1604: 163: 1456:
Lim, E; Pon A; Djoumbou Y; Knox C; Shrivastava S; Guo AC; Neveu V; Wishart DS. (Jan 2010).
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The latest release of the database (version 5.0) contains 9591 drug entries including 2037
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database is a comprehensive, freely accessible, online database containing information on
8: 1328:"The Dizzying Problem of Citationless Knowledge "Facts" That Take On a Life of Their Own" 1629: 1580: 1555: 1531: 1506: 1482: 1457: 1433: 1408: 1383: 1358: 1300: 1275: 1248: 1223: 242: 180: 1634: 1585: 1536: 1487: 1438: 1388: 1305: 1253: 278:
Table 1. Comparison between the coverage in DrugBank 1.0, 2.0, 3.0 and DrugBank 4.0.
211: 1624: 1616: 1575: 1567: 1526: 1518: 1477: 1469: 1428: 1420: 1378: 1370: 1295: 1287: 1243: 1235: 1219: 271: 76: 1605:"DrugBank: a comprehensive resource for in silico drug discovery and exploration" 1224:"DrugBank: a comprehensive resource for in silico drug discovery and exploration" 1158: 171: 63: 86:
DrugBank: a comprehensive resource for in silico drug discovery and exploration.
1458:"T3DB: a comprehensively annotated database of common toxins and their targets" 259: 246: 230: 207: 195: 1651: 263: 68:
University of Alberta and The Metabolomics Innovation Centre, Alberta, Canada
1638: 1589: 1540: 1491: 1442: 1392: 1309: 1257: 1178: 1571: 1522: 1374: 1620: 1473: 1424: 1291: 1239: 226: 238: 1556:"DrugBank 3.0: a comprehensive resource for 'omics' research on drugs" 176: 1276:"DrugBank: a knowledgebase for drugs, drug actions and drug targets" 116: 203: 199: 167: 26: 16:
Online database containing information on drugs and drug targets
1153: 234: 215: 1183: 222: 214:. Additionally, 4270 non-redundant protein (i.e. drug target/ 266:, extensive food-drug and drug-drug interactions as well as 1188: 1168: 267: 179:; Knowledge also often links to Drugbank, posing potential 159: 1553: 100: 191: 1455: 241:, SMPDB contains pathway diagrams for nearly 700 human 1505:
Jewison, T; Su Y; Disfany FM; et al. (Jan 2014).
1356: 1130: 1125: 1120: 1115: 1103: 1098: 1093: 1088: 1076: 1071: 1066: 1061: 1049: 1044: 1039: 1034: 1022: 1017: 1012: 1007: 995: 990: 985: 980: 976:
Total No. of experimental and FDA small molecule drugs
968: 963: 958: 953: 941: 936: 931: 926: 914: 909: 904: 899: 887: 882: 877: 872: 860: 855: 850: 845: 833: 828: 823: 818: 806: 801: 796: 791: 779: 774: 769: 764: 752: 747: 742: 737: 725: 720: 715: 710: 698: 693: 688: 683: 671: 666: 661: 656: 644: 639: 634: 629: 617: 612: 607: 602: 590: 585: 580: 575: 563: 558: 553: 548: 536: 531: 526: 521: 517:
No. of drugs with taxonomic classification information
509: 504: 499: 494: 482: 477: 472: 467: 455: 450: 445: 440: 428: 423: 418: 413: 401: 396: 391: 386: 374: 369: 364: 359: 347: 342: 337: 332: 320: 315: 310: 305: 1504: 1405: 1359:"DrugBank 5.0: shedding new light on drug metabolism" 1274:
Wishart, DS; Knox C; Guo AC; et al. (Jan 2008).
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cases while all other users require a paid license.
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Total No. of experimental and FDA drugs (all types)
706:
No. of drugs with drug-target binding constant data
571:No. of drugs with patent/pricing/manufacturer data 166:and The Metabolomics Innovation Centre located in 140:Every 2 years with monthly corrections and updates 221:Four additional databases, HMDB, T3DB, SMPDB and 1649: 1409:"HMDB: a knowledgebase for the human metabolome" 787:No. of drugs with chemical synthesis information 162:and drug targets created and maintained by the 1352: 1350: 1348: 1269: 1267: 1214: 1212: 1210: 1208: 1057:No. of approved-drug enzymes/carriers (unique) 1321: 1319: 1547: 1498: 1449: 1399: 1345: 1264: 1205: 463:No. of illustrated drug metabolism pathways 382:No. of drugs with metabolizing enzyme data 1316: 1222:; Knox C; Guo AC; et al. (Jan 2006). 25: 1628: 1579: 1530: 1481: 1432: 1382: 1299: 1247: 1084:No. of all drug enzymes/carriers (unique) 170:, Canada. As both a bioinformatics and a 1325: 814:No. of FDA-approved small molecule drugs 355:No. of illustrated drug-action pathways 1602: 490:No. of drugs with drug transporter data 409:No. of drug metabolites with structures 1650: 652:No. of ADMET parameters (Caco-2, LogS) 225:are also part of a general suite of 1138: 13: 1326:Harrison, Stephen (7 March 2019). 544:No. of SNP-associated drug effects 252: 14: 1684: 1507:"Small Molecule Pathway Database" 198:drugs, 241 FDA-approved biotech ( 1030:No. of all drug targets (unique) 436:No. of drug-metabolism reactions 679:No. of QSAR parameters per drug 301:No. of data fields per DrugCard 1596: 1111:No. of external database links 1: 1199: 733:No. of drugs with NMR spectra 625:No. of drug–drug interactions 598:No. of food–drug interactions 1566:(Database issue): D1035-41. 1194:Therapeutic Targets Database 1174:List of biological databases 760:No. of drugs with MS spectra 7: 1517:(Database issue): D478-84. 1419:(Database issue): D603-10. 1369:(Database issue): D1091-7. 1234:(Database issue): D668-72. 1147: 1129: 1124: 1119: 1114: 1102: 1097: 1092: 1087: 1075: 1070: 1065: 1060: 1048: 1043: 1038: 1033: 1021: 1016: 1011: 1006: 994: 989: 984: 979: 967: 962: 957: 952: 940: 935: 930: 925: 913: 908: 903: 898: 886: 881: 876: 871: 859: 854: 849: 844: 832: 827: 822: 817: 805: 800: 795: 790: 778: 773: 768: 763: 751: 746: 741: 736: 724: 719: 714: 709: 697: 692: 687: 682: 670: 665: 660: 655: 643: 638: 633: 628: 616: 611: 606: 601: 589: 584: 579: 574: 562: 557: 552: 547: 535: 530: 525: 520: 508: 503: 498: 493: 481: 476: 471: 466: 454: 449: 444: 439: 427: 422: 417: 412: 400: 395: 390: 385: 373: 368: 363: 358: 346: 341: 336: 331: 319: 314: 309: 304: 10: 1689: 1603:Wishart, David S. (2006). 1468:(Database issue): D781-6. 1286:(Database issue): D901-6. 868:No. of nutraceutical drugs 949:No. of experimental drugs 144: 134: 129: 111: 95: 90: 82: 72: 62: 57: 46: 38: 33: 24: 1668:Human drug metabolites 1609:Nucleic Acids Research 1560:Nucleic Acids Research 1511:Nucleic Acids Research 1462:Nucleic Acids Research 1413:Nucleic Acids Research 1363:Nucleic Acids Research 1280:Nucleic Acids Research 1228:Nucleic Acids Research 895:No. of withdrawn drugs 1663:Metabolomic databases 164:University of Alberta 1673:Biological databases 1615:(suppl_1): 668–672. 922:No. of illicit drugs 841:No. of biotech drugs 1572:10.1093/nar/gkq1126 1523:10.1093/nar/gkt1067 1375:10.1093/nar/gkt1068 328:No. of search types 279: 21: 1658:Chemical databases 1621:10.1093/nar/gkj067 1474:10.1093/nar/gkp934 1425:10.1093/nar/gkn810 1292:10.1093/nar/gkm958 1240:10.1093/nar/gkj067 277: 243:metabolic pathways 237:and environmental 212:experimental drugs 181:circular reporting 19: 1136: 1135: 272:binding constants 152: 151: 1680: 1643: 1642: 1632: 1600: 1594: 1593: 1583: 1551: 1545: 1544: 1534: 1502: 1496: 1495: 1485: 1453: 1447: 1446: 1436: 1403: 1397: 1396: 1386: 1354: 1343: 1342: 1340: 1338: 1323: 1314: 1313: 1303: 1271: 1262: 1261: 1251: 1216: 1139:Scope and access 1132: 1127: 1122: 1117: 1105: 1100: 1095: 1090: 1078: 1073: 1068: 1063: 1051: 1046: 1041: 1036: 1024: 1019: 1014: 1009: 997: 992: 987: 982: 970: 965: 960: 955: 943: 938: 933: 928: 916: 911: 906: 901: 889: 884: 879: 874: 862: 857: 852: 847: 835: 830: 825: 820: 808: 803: 798: 793: 781: 776: 771: 766: 754: 749: 744: 739: 727: 722: 717: 712: 700: 695: 690: 685: 673: 668: 663: 658: 646: 641: 636: 631: 619: 614: 609: 604: 592: 587: 582: 577: 565: 560: 555: 550: 538: 533: 528: 523: 511: 506: 501: 496: 484: 479: 474: 469: 457: 452: 447: 442: 430: 425: 420: 415: 403: 398: 393: 388: 376: 371: 366: 361: 349: 344: 339: 334: 322: 317: 312: 307: 280: 276: 148:Manually curated 125: 122: 120: 118: 107: 104: 102: 83:Primary citation 77:David S. Wishart 29: 22: 18: 1688: 1687: 1683: 1682: 1681: 1679: 1678: 1677: 1648: 1647: 1646: 1601: 1597: 1552: 1548: 1503: 1499: 1454: 1450: 1404: 1400: 1355: 1346: 1336: 1334: 1324: 1317: 1272: 1265: 1217: 1206: 1202: 1159:Drug metabolism 1150: 1141: 260:withdrawn drugs 255: 253:Version history 172:cheminformatics 145:Curation policy 136: 115: 99: 64:Research center 48: 17: 12: 11: 5: 1686: 1676: 1675: 1670: 1665: 1660: 1645: 1644: 1595: 1546: 1497: 1448: 1398: 1344: 1332:Slate Magazine 1315: 1263: 1203: 1201: 1198: 1197: 1196: 1191: 1186: 1181: 1176: 1171: 1166: 1161: 1156: 1149: 1146: 1140: 1137: 1134: 1133: 1128: 1123: 1118: 1113: 1107: 1106: 1101: 1096: 1091: 1086: 1080: 1079: 1074: 1069: 1064: 1059: 1053: 1052: 1047: 1042: 1037: 1032: 1026: 1025: 1020: 1015: 1010: 1005: 999: 998: 993: 988: 983: 978: 972: 971: 966: 961: 956: 951: 945: 944: 939: 934: 929: 924: 918: 917: 912: 907: 902: 897: 891: 890: 885: 880: 875: 870: 864: 863: 858: 853: 848: 843: 837: 836: 831: 826: 821: 816: 810: 809: 804: 799: 794: 789: 783: 782: 777: 772: 767: 762: 756: 755: 750: 745: 740: 735: 729: 728: 723: 718: 713: 708: 702: 701: 696: 691: 686: 681: 675: 674: 669: 664: 659: 654: 648: 647: 642: 637: 632: 627: 621: 620: 615: 610: 605: 600: 594: 593: 588: 583: 578: 573: 567: 566: 561: 556: 551: 546: 540: 539: 534: 529: 524: 519: 513: 512: 507: 502: 497: 492: 486: 485: 480: 475: 470: 465: 459: 458: 453: 448: 443: 438: 432: 431: 426: 421: 416: 411: 405: 404: 399: 394: 389: 384: 378: 377: 372: 367: 362: 357: 351: 350: 345: 340: 335: 330: 324: 323: 318: 313: 308: 303: 297: 296: 293: 290: 287: 284: 254: 251: 247:food additives 231:cheminformatic 210:and over 6000 208:nutraceuticals 196:small molecule 150: 149: 146: 142: 141: 138: 132: 131: 127: 126: 113: 109: 108: 97: 93: 92: 88: 87: 84: 80: 79: 74: 70: 69: 66: 60: 59: 55: 54: 50: 44: 43: 40: 36: 35: 31: 30: 15: 9: 6: 4: 3: 2: 1685: 1674: 1671: 1669: 1666: 1664: 1661: 1659: 1656: 1655: 1653: 1640: 1636: 1631: 1626: 1622: 1618: 1614: 1610: 1606: 1599: 1591: 1587: 1582: 1577: 1573: 1569: 1565: 1561: 1557: 1550: 1542: 1538: 1533: 1528: 1524: 1520: 1516: 1512: 1508: 1501: 1493: 1489: 1484: 1479: 1475: 1471: 1467: 1463: 1459: 1452: 1444: 1440: 1435: 1430: 1426: 1422: 1418: 1414: 1410: 1402: 1394: 1390: 1385: 1380: 1376: 1372: 1368: 1364: 1360: 1353: 1351: 1349: 1333: 1329: 1322: 1320: 1311: 1307: 1302: 1297: 1293: 1289: 1285: 1281: 1277: 1270: 1268: 1259: 1255: 1250: 1245: 1241: 1237: 1233: 1229: 1225: 1221: 1215: 1213: 1211: 1209: 1204: 1195: 1192: 1190: 1187: 1185: 1182: 1180: 1177: 1175: 1172: 1170: 1167: 1165: 1162: 1160: 1157: 1155: 1152: 1151: 1145: 1112: 1109: 1108: 1085: 1082: 1081: 1058: 1055: 1054: 1031: 1028: 1027: 1004: 1001: 1000: 977: 974: 973: 950: 947: 946: 923: 920: 919: 896: 893: 892: 869: 866: 865: 842: 839: 838: 815: 812: 811: 788: 785: 784: 761: 758: 757: 734: 731: 730: 707: 704: 703: 680: 677: 676: 653: 650: 649: 626: 623: 622: 599: 596: 595: 572: 569: 568: 545: 542: 541: 518: 515: 514: 491: 488: 487: 464: 461: 460: 437: 434: 433: 410: 407: 406: 383: 380: 379: 356: 353: 352: 329: 326: 325: 302: 299: 298: 294: 291: 288: 285: 282: 281: 275: 273: 269: 265: 264:illicit drugs 261: 250: 248: 244: 240: 236: 232: 228: 224: 219: 217: 213: 209: 205: 201: 197: 193: 188: 184: 182: 178: 173: 169: 165: 161: 157: 147: 143: 139: 133: 130:Miscellaneous 128: 124: 114: 110: 106: 98: 94: 89: 85: 81: 78: 75: 71: 67: 65: 61: 56: 51: 45: 42:Drug database 41: 37: 32: 28: 23: 1612: 1608: 1598: 1563: 1559: 1549: 1514: 1510: 1500: 1465: 1461: 1451: 1416: 1412: 1401: 1366: 1362: 1335:. Retrieved 1331: 1283: 1279: 1231: 1227: 1179:Pharmacology 1142: 1110: 1083: 1056: 1029: 1002: 975: 948: 921: 894: 867: 840: 813: 786: 759: 732: 705: 678: 651: 624: 597: 570: 543: 516: 489: 462: 435: 408: 381: 354: 327: 300: 256: 220: 206:) drugs, 96 189: 185: 155: 153: 135:Data release 112:Download URL 1220:Wishart, DS 227:metabolomic 39:Description 1652:Categories 1337:9 November 1200:References 239:pollutants 194:-approved 123:/downloads 73:Laboratory 47:Data types 283:Category 177:Knowledge 137:frequency 119:.drugbank 103:.drugbank 1639:16381955 1590:21059682 1541:24203708 1492:19897546 1443:18953024 1393:24203711 1310:18048412 1258:16381955 1148:See also 183:issues. 156:DrugBank 49:captured 20:DrugBank 1630:1347430 1581:3013709 1532:3965088 1483:2808899 1434:2686599 1384:3965102 1301:2238889 1249:1347430 204:peptide 200:protein 168:Alberta 96:Website 58:Contact 34:Content 1637:  1627:  1588:  1578:  1539:  1529:  1490:  1480:  1441:  1431:  1391:  1381:  1308:  1298:  1256:  1246:  1154:ChEMBL 645:14,150 640:13,795 635:13,242 235:toxins 216:enzyme 91:Access 1184:SMPDB 1050:4,115 1045:4,326 1040:3,037 1035:2,133 1023:7,713 1018:6,816 1013:4,897 1008:3,909 996:7,561 991:6,684 986:4,774 981:3,796 969:6,009 964:5,210 959:3,116 954:2,894 834:1,558 829:1,424 824:1,344 807:1,285 672:6,667 618:1,180 613:1,039 591:1,450 586:1,208 537:6,713 456:1,308 429:1,239 402:1,037 268:ADMET 223:FooDB 160:drugs 1635:PMID 1586:PMID 1537:PMID 1488:PMID 1439:PMID 1389:PMID 1339:2019 1306:PMID 1254:PMID 1189:T3DB 1169:KEGG 1164:HMDB 295:4.0 292:3.0 289:2.0 286:1.0 262:and 154:The 105:.com 1625:PMC 1617:doi 1576:PMC 1568:doi 1527:PMC 1519:doi 1478:PMC 1470:doi 1429:PMC 1421:doi 1379:PMC 1371:doi 1296:PMC 1288:doi 1244:PMC 1236:doi 1104:253 1099:169 1077:245 1072:164 942:190 937:189 932:188 861:155 856:132 851:123 846:113 819:841 780:384 753:306 726:791 667:890 662:276 608:714 564:201 559:113 510:623 505:516 397:762 375:232 370:168 321:208 316:148 311:108 192:FDA 121:.ca 117:www 101:www 1654:: 1633:. 1623:. 1613:34 1611:. 1607:. 1584:. 1574:. 1564:39 1562:. 1558:. 1535:. 1525:. 1515:42 1513:. 1509:. 1486:. 1476:. 1466:38 1464:. 1460:. 1437:. 1427:. 1417:37 1415:. 1411:. 1387:. 1377:. 1367:42 1365:. 1361:. 1347:^ 1330:. 1318:^ 1304:. 1294:. 1284:36 1282:. 1278:. 1266:^ 1252:. 1242:. 1232:34 1230:. 1226:. 1207:^ 1131:33 1126:31 1121:18 1116:12 915:78 910:68 905:57 888:87 883:82 878:69 873:61 802:38 797:38 699:23 694:14 483:53 348:18 343:16 338:12 306:88 249:. 1641:. 1619:: 1592:. 1570:: 1543:. 1521:: 1494:. 1472:: 1445:. 1423:: 1395:. 1373:: 1341:. 1312:. 1290:: 1260:. 1238:: 1094:0 1089:0 1067:0 1062:0 927:0 900:0 792:0 775:0 770:0 765:0 748:0 743:0 738:0 721:0 716:0 711:0 689:6 684:5 657:0 630:0 603:0 581:0 576:0 554:0 549:0 532:0 527:0 522:0 500:0 495:0 478:0 473:0 468:0 451:0 446:0 441:0 424:0 419:0 414:0 392:0 387:0 365:0 360:0 333:8 229:/ 202:/

Index


Research center
David S. Wishart
www.drugbank.com
www.drugbank.ca/downloads
drugs
University of Alberta
Alberta
cheminformatics
Knowledge
circular reporting
FDA
small molecule
protein
peptide
nutraceuticals
experimental drugs
enzyme
FooDB
metabolomic
cheminformatic
toxins
pollutants
metabolic pathways
food additives
withdrawn drugs
illicit drugs
ADMET
binding constants
ChEMBL

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