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The Gene Wiki project was initiated in 2007 or so as an effort to systematically improve the state of gene articles in
Knowledge. The primary mechanism for that project was data-driven bot edits based on commonly-used databases in biomedical research (e.g., NCBI Entrez, UniProt, PDB). More info on
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This bot has created or amended ~9,000 pages corresponding to mammalian genes. Each new page was seeded with content from databases in the public domain. This content included information about the gene's symbol, description, function, genomic location, structure and identifiers. Genes which did
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for protein structure images corresponding to the protein box subject. If it finds one, the image is added; if not and sufficient information is available, the bot generates, uploads, and links a new image. This bot does not create pages or edit full-text articles (for the time being). The source
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gene annotation service (which itself compiles information from public-domain databases) and compares it to the values in the existing article infoboxes. If the article information is out of date, incorrect, or missing, the infobox is updated with the correct values. It then scans the
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In this phase of the
ProteinBoxBot, we will expand the scope beyond human genes and proteins. This plan is currently in its infancy and under active discussion. Scope has been discussed with
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If a corresponding
Knowledge page already exists, it will be automatically loaded. If not, a page creation interface will be shown (but may take up to one minute to appear).
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Currently, we are expanding this game plan to other biomedical concepts. More details are in the
ProteinBoxBot 3 section below.
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A new version of the bot was created to maintain the
Protein Boxes on Gene Wiki pages. It queries information from the
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It may take some time for BioGPS to register the update, but you should be able to see it by viewing the
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not have any existing wikipedia pages for its symbol, aliases, or title were created (e.g.,
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edits that would be extremely tedious to do manually, in accordance with the
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https://code.google.com/archive/p/protein-box-bot/source/default/source
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Administrators: if this bot is malfunctioning or causing harm, please
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tag to a page or template to prevent the bot from editing it:
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WikiProject
Molecular and Cellular Biology participants
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310:Knowledge:Bots/Requests for approval/ProteinBoxBot
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137:Molecular & Cellular Biology WikiProject
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322:User:ProteinBoxBot/Protein_Directory
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479:ProteinBoxBot's user contributions
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