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mtDNA control region

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Michikawa Y, Mazzucchelli F, Bresolin N, Scarlato G, Attardi G (October 1999). "Aging-dependent large accumulation of point mutations in the human mtDNA control region for replication".
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linked with the subjects' endurance. It was speculated that this was because the control region affects replication and transcription in the mitochondria.
307:"Population variation of human mtDNA control region sequences detected by enzymatic amplification and sequence-specific oligonucleotide probes" 204:
are sometimes used synonymously in the literature; specifically the control region includes the D-loop along with adjacent transcription
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Location of the control region (CR) in the human mitochondrial genome (grey box), with the three hypervariable regions (HV: green boxes).
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Anderson S, Bankier AT, Barrell BG, et al. (April 1981). "Sequence and organization of the human mitochondrial genome".
409:"Evidence for variable selective pressures at a large secondary structure of the human mitochondrial DNA control region" 590:"Polymorphisms in control region of mtDNA relates to individual differences in endurance capacity or trainability" 750: 499:
Ojala D, Montoya J, Attardi G (April 1981). "tRNA punctuation model of RNA processing in human mitochondria".
351:"Human Mitochondrial DNA Variation and Evolution: Analysis of Nucleotide Sequences from Seven Individuals" 350: 257: 173: 678:"A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms" 138: 169: 142: 508: 457: 274: 146: 130: 8: 189: 154: 34: 512: 461: 117: 659: 634: 532: 481: 375: 323: 306: 253: 205: 177: 162: 699: 664: 611: 567: 524: 473: 430: 380: 328: 100: 244:
the control region of 55 subjects and compared their haplotype with the increase in
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Stoneking M, Hedgecock D, Higuchi RG, Vigilant L, Erlich HA (February 1991).
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Sachidanandam R, Weissman D, Schmidt SC, et al. (February 2001).
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Murakami H, Ota A, Simojo H, Okada M, Ajisaka R, Kuno S (June 2002).
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region of the human mtDNA genome, with polymorphism concentrated in
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Page for Mitochondrial DNA control region secondary structure A
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Pereira F, Soares P, Carneiro J, et al. (December 2008).
137:. This region controls RNA and DNA synthesis. It is the most 675: 730: 208:. For this reason, the control region is also known by the 60: 150: 77: 149:
in these regions is 1.7%. Despite this variability, an
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Mitochondrial DNA control region secondary structure A
406: 718: 498: 295:DNA Learning Center, Cold Spring Harbor Laboratory 737: 348: 721:- the Mitochondrial DNA Control Region Database 256:. They found that different haplotypes were 153:transcript from this region has a conserved 632: 188:but not in mice or cows, where it has been 349:Aquadro CF, Greenberg BD (February 1983). 195: 27: 16:Non-coding region of the mitochondrial DNA 693: 658: 605: 424: 374: 322: 240:capacity in human subjects. A 2002 study 116: 583: 581: 402: 400: 344: 342: 738: 293:Structure of the Mitochondrial Genome 168:The mtDNA control region contains the 578: 397: 339: 176:for both strands. There is also an 161:) which has been found to be under 13: 625: 227: 14: 762: 712: 172:of one strand, and the origin of 543: 492: 441: 298: 286: 1: 280: 200:The control region and mtDNA 633:Stoneking M (October 2000). 564:10.1126/science.286.5440.774 41:of the mtDNA control region. 7: 263: 10: 767: 367:10.1093/genetics/103.2.287 99: 87: 76: 71: 59: 51: 46: 26: 21: 607:10.2170/jjphysiol.52.247 196:Distinction from D-loop 180:thought to code for 7s 751:Mitochondrial genetics 236:have been linked with 122: 426:10.1093/molbev/msn225 232:mtDNA control region 170:origin of replication 143:hypervariable regions 120: 275:Hypervariable region 252:after an eight-week 147:nucleotide diversity 131:mitochondrial genome 127:mtDNA control region 513:1981Natur.290..470O 462:1981Natur.290..457A 220:oop and associated 155:secondary structure 35:secondary structure 212:DLP, standing for 178:open reading frame 163:selective pressure 129:is an area of the 123: 639:Am. J. Hum. Genet 311:Am. J. Hum. Genet 112: 111: 758: 707: 697: 695:10.1038/35057149 688:(6822): 928–33. 672: 662: 620: 619: 609: 585: 576: 575: 547: 541: 540: 521:10.1038/290470a0 496: 490: 489: 470:10.1038/290457a0 456:(5806): 457–65. 445: 439: 438: 428: 404: 395: 394: 392: 391: 378: 346: 337: 336: 326: 302: 296: 290: 254:training program 206:promoter regions 31: 19: 18: 766: 765: 761: 760: 759: 757: 756: 755: 736: 735: 715: 710: 628: 626:Further reading 623: 594:Jpn. J. Physiol 586: 579: 558:(5440): 774–9. 548: 544: 507:(5806): 470–4. 497: 493: 446: 442: 419:(12): 2759–70. 413:Mol. Biol. Evol 405: 398: 389: 387: 347: 340: 303: 299: 291: 287: 283: 266: 249: 230: 228:Endurance study 198: 114: 42: 17: 12: 11: 5: 764: 754: 753: 748: 734: 733: 724: 722: 714: 713:External links 711: 709: 708: 673: 651:10.1086/303092 645:(4): 1029–32. 629: 627: 624: 622: 621: 577: 542: 491: 440: 396: 361:(2): 287–312. 338: 297: 284: 282: 279: 278: 277: 272: 265: 262: 247: 229: 226: 197: 194: 145:. The average 135:non-coding DNA 110: 109: 104: 97: 96: 91: 85: 84: 81: 74: 73: 69: 68: 63: 57: 56: 53: 49: 48: 44: 43: 33:The consensus 32: 24: 23: 15: 9: 6: 4: 3: 2: 763: 752: 749: 747: 744: 743: 741: 732: 728: 725: 723: 720: 717: 716: 705: 701: 696: 691: 687: 683: 679: 674: 670: 666: 661: 656: 652: 648: 644: 640: 636: 631: 630: 617: 613: 608: 603: 600:(3): 247–56. 599: 595: 591: 584: 582: 573: 569: 565: 561: 557: 553: 546: 538: 534: 530: 526: 522: 518: 514: 510: 506: 502: 495: 487: 483: 479: 475: 471: 467: 463: 459: 455: 451: 444: 436: 432: 427: 422: 418: 414: 410: 403: 401: 386: 382: 377: 372: 368: 364: 360: 356: 352: 345: 343: 334: 330: 325: 320: 317:(2): 370–82. 316: 312: 308: 301: 294: 289: 285: 276: 273: 271: 268: 267: 261: 259: 258:significantly 255: 251: 243: 239: 235: 225: 223: 219: 215: 211: 207: 203: 193: 191: 187: 183: 182:ribosomal RNA 179: 175: 174:transcription 171: 166: 164: 160: 156: 152: 148: 144: 140: 136: 132: 128: 119: 115: 108: 105: 102: 98: 95: 92: 90: 86: 83:Antisense RNA 82: 79: 75: 70: 67: 64: 62: 58: 54: 50: 45: 40: 36: 30: 25: 20: 685: 681: 642: 638: 597: 593: 555: 551: 545: 504: 500: 494: 453: 449: 443: 416: 412: 388:. Retrieved 358: 354: 314: 310: 300: 288: 231: 221: 217: 213: 199: 167: 158: 126: 124: 113: 139:polymorphic 47:Identifiers 740:Categories 390:2010-07-29 281:References 234:haplotypes 224:romoters. 103:structures 72:Other data 39:haplotypes 242:sequenced 238:endurance 133:which is 89:Domain(s) 55:mtDNA ssA 704:11237013 669:10968778 616:12230801 572:10531063 435:18845547 355:Genetics 264:See also 159:pictured 94:Mammalia 37:for all 660:1287875 552:Science 537:4323371 529:7219536 509:Bibcode 486:4355527 478:7219534 458:Bibcode 385:6299878 376:1219980 333:1990843 324:1683035 210:acronym 190:deleted 66:RF01853 702:  682:Nature 667:  657:  614:  570:  535:  527:  501:Nature 484:  476:  450:Nature 433:  383:  373:  331:  321:  270:D-loop 202:D-loop 186:humans 52:Symbol 719:EMPOP 533:S2CID 482:S2CID 731:Rfam 700:PMID 665:PMID 612:PMID 568:PMID 525:PMID 474:PMID 431:PMID 381:PMID 329:PMID 125:The 107:PDBe 80:type 61:Rfam 746:DNA 729:at 690:doi 686:409 655:PMC 647:doi 602:doi 560:doi 556:286 517:doi 505:290 466:doi 454:290 421:doi 371:PMC 363:doi 359:103 319:PMC 250:max 184:in 151:RNA 101:PDB 78:RNA 742:: 698:. 684:. 680:. 663:. 653:. 643:67 641:. 637:. 610:. 598:52 596:. 592:. 580:^ 566:. 554:. 531:. 523:. 515:. 503:. 480:. 472:. 464:. 452:. 429:. 417:25 415:. 411:. 399:^ 379:. 369:. 357:. 353:. 341:^ 327:. 315:48 313:. 309:. 246:VO 192:. 165:. 706:. 692:: 671:. 649:: 618:. 604:: 574:. 562:: 539:. 519:: 511:: 488:. 468:: 460:: 437:. 423:: 393:. 365:: 335:. 248:2 222:P 218:L 216:- 214:D 157:(

Index


secondary structure
haplotypes
Rfam
RF01853
RNA
Domain(s)
Mammalia
PDB
PDBe

mitochondrial genome
non-coding DNA
polymorphic
hypervariable regions
nucleotide diversity
RNA
secondary structure
selective pressure
origin of replication
transcription
open reading frame
ribosomal RNA
humans
deleted
D-loop
promoter regions
acronym
haplotypes
endurance

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