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David Sankoff

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and David Sankoff are responsible for transforming bioinformatics from a ‘stamp collection' of ill-defined problems into a rigorous discipline with important biological applications."
321:(Cambridge) and serves on the editorial boards of a number of bioinformatics, computational biology and linguistics journals. Sankoff is best known for his pioneering contributions in 2170: 2109: 2059: 1378: 1804: 2104: 365:. Starting with his doctoral research, he developed mathematical formulations to a number of pivotal concepts in socio- and historical linguistics, including 2094: 2013: 1993: 1789: 310:, computer scientist and linguist. He holds the Canada Research Chair in Mathematical Genomics in the Mathematics and Statistics Department at the 2155: 2008: 1998: 1972: 1398: 1317: 545: 485: 467: 240: 2038: 1768: 722: 1962: 1942: 1937: 406: 314:, and is cross-appointed to the Biology Department and the School of Information Technology and Engineering. He was founding editor of the 1363: 235: 1385: 778: 474: 141: 230: 654:
Social Lives in Language – Sociolinguistics and multilingual speech communities: Celebrating the work of Gillian Sankoff
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Sankoff, D; C. Morel; R. J. Cedergren (1973). "Evolution of 5S RNA and the non-randomness of base replacement".
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Cedergren, H. J.; D. Sankoff (1974). "Variable rules: performance as a statistical reflection of competence".
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Sankoff, D.; S. Laberge (1978). "The linguistic market and the statistical explanation of variability".
2084: 2003: 1870: 574: 437:. In 1980, Robert Cedergen and David Sankoff created the first research group in bioinformatics at the 1393: 1321: 1275: 433:
on random inputs; the constants of proportionality arising in this study have come to be known as the
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in 1969. In 1971, Sankoff became interested in molecular sequence comparison and devised the first
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Sankoff published his first paper in 1963 while he was an undergraduate student in Mathematics at
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Friesen, J. D.; Sankoff, D.; Siminovitch, L. (1963). "Radiobiological Studies of Vaccinia Virus".
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David Sankoff at "Models and Algorithms for Genome Evolution" in 2013, Bromont, Quebec.
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After completing his Ph.D. in Mathematics, Sankoff began his academic career at the
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Sankoff, David (1970). "On the rate of replacement of word-meaning relationships".
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Proceedings of the National Academy of Sciences of the United States of America
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Fellows of the International Society for Computational Biology
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Making waves : the story of variationist sociolinguistics
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2023 fellows of the Association for Computing Machinery
647:"How to Predict the Evolution of a Bilingual Community" 306:(born December 31, 1942) is a Canadian mathematician, 758:"Journal of Bioinformatics and Computational Biology" 405:. In 1973, Sankoff and Robert Cedergren developed a 1010: 943: 800:"Molecular Phylogenetics and Evolution, Volume 43" 333:. In particular, he had a key role in introducing 989: 2122: 1303:Professor Angela McLean awarded the Weldon Medal 563: 561: 559: 329:. He is considered to be one of the founders of 1399:International Society for Computational Biology 1015:(1981). "A formal grammar for code switching". 619: 617: 546:International Society for Computational Biology 486:International Society for Computational Biology 468:International Society for Computational Biology 1318:"David Sankoff - Excellence in Research Award" 1145: 257:Historical Linguistics as a Stochastic Process 1379: 556: 497:Ontario Distinguished Researcher Award (2002) 441:. Sankoff's work in bioinformatics addresses 892: 614: 241:Bureau of Statistics of Papua and New Guinea 982: 693:. Chichester, West Sussex, United Kingdom. 652:In Meyerhoff, Miriam and Naomi Nagy (eds.), 1386: 1372: 721:: CS1 maint: location missing publisher ( 630: 29: 1087: 1077: 1028: 995:Linguistic Variation: Models and Methods 957: 912: 840: 818: 816: 605: 595: 531: 529: 1227:"ISCB Senior Scientist Award to Sankoff" 1205:"History of the Robert Cedergren Centre" 857: 637: 421:, laying the algorithmic foundations of 236:Canadian Institute for Advanced Research 1051: 898: 822: 667: 644: 2156:Fellows of the Royal Society of Canada 2123: 813: 567: 526: 384: 1367: 1246: 1244: 475:Fellow of the Royal Society of Canada 142:Fellow of the Royal Society of Canada 1224: 1045: 688: 535: 460: 937: 509:Excellence in Research Award (2013) 13: 1241: 1104: 779:"Journal of Computational Biology" 470:'s Senior Scientist Award in 2003. 431:longest common subsequence problem 231:Centre de Recherches Mathématiques 14: 2182: 689:Sali, Tagliamonte (2015-11-02). 373:(with Henrietta Cedergren), the 121:Nucleic acid secondary structure 74: 1336: 1310: 1294: 1268: 1197: 1139: 1004: 792: 1155:Journal of Applied Probability 842:10.1093/bioinformatics/16.1.41 771: 750: 729: 682: 1: 678:Mathematics Genealogy Project 520: 319:Language Variation and Change 878:10.1016/0042-6822(63)90203-4 597:10.1371/journal.pcbi.0020105 429:studied the behavior of the 356: 7: 1000:. New York: Academic Press. 466:Inaugural recipient of the 415:multiple sequence alignment 160:ISCB Senior Scientist Award 10: 2187: 575:PLOS Computational Biology 399:Needleman–Wunsch algorithm 2052: 1981: 1910: 1879: 1828: 1777: 1701: 1650: 1614: 1573: 1527: 1496: 1455: 1409: 1039:10.1080/08351818109370523 435:Chvátal–Sankoff constants 323:computational linguistics 283: 279: 267: 249: 213: 182: 175: 134: 98: 87: 69: 40: 28: 21: 2166:McGill University alumni 2141:Anglophone Quebec people 626:publications indexed by 2161:Academics from Montreal 645:Sankoff, David (2008). 453:, genome evolution and 443:RNA secondary structure 425:. In 1975, Sankoff and 407:joint estimation method 371:variable rules analysis 106:Variable rules analysis 2146:Canada Research Chairs 1125:10.1038/newbio245232a0 439:University of Montreal 391:University of Montreal 375:linguistic marketplace 341:and other problems in 327:computational genomics 226:Université de Montréal 126:Computational genomics 1017:Papers in Linguistics 501:Weldon Memorial Prize 447:genome rearrangements 343:computational biology 166:Weldon Memorial Prize 148:Canada Research Chair 1324:on 24 September 2014 1231:iscb.org/iscb-awards 1052:Sankoff, D. (1972). 993:In D. Sankoff (ed.), 823:Sankoff, D. (2000). 737:"BMC Bioinformatics" 512:Honorary doctorate, 507:University of Ottawa 492:Marcel-Vincent Prize 423:comparative genomics 312:University of Ottawa 274:Donald Andrew Dawson 221:University of Ottawa 2044:Gustavo Stolovitzky 1668:Julio Collado-Vides 1079:10.1073/pnas.69.1.4 1070:1972PNAS...69....4S 588:2006PLSCB...2..105M 568:Maisel, M. (2006). 514:Tel Aviv University 385:Career and research 335:dynamic programming 2110:Reinhard Schneider 1902:Marie-France Sagot 1897:Xiaole Shirley Liu 1113:Nature New Biology 997:(pp. 239-250) 656:(pp. 179–194) 451:sequence alignment 403:sequence alignment 339:sequence alignment 316:scientific journal 116:Sequence alignment 16:Canadian scientist 2118: 2117: 2024:Núria López Bigas 1958:Katherine Pollard 1918:Serafim Batzoglou 1841:Terry Gaasterland 1565:Gunnar von Heijne 1504:Michael Ashburner 1282:(in French). 2019 461:Awards and honors 363:McGill University 301: 300: 177:Scientific career 92:McGill University 51:December 31, 1942 2178: 2075:Takashi Gojobori 2034:Teresa Przytycka 2014:Christina Leslie 1836:Patricia Babbitt 1815:Olga Troyanskaya 1739:Christine Orengo 1637:Robert Gentleman 1488:Alfonso Valencia 1447:Michael Waterman 1403:year of election 1388: 1381: 1374: 1365: 1364: 1359: 1358: 1356: 1355: 1340: 1334: 1333: 1331: 1329: 1320:. Archived from 1314: 1308: 1307: 1298: 1292: 1291: 1289: 1287: 1272: 1266: 1265: 1263: 1262: 1248: 1239: 1238: 1233:. Archived from 1222: 1216: 1215: 1213: 1211: 1201: 1195: 1193: 1143: 1137: 1136: 1119:(147): 232–234. 1108: 1102: 1101: 1091: 1081: 1049: 1043: 1042: 1032: 1011:Sankoff, David; 1008: 1002: 1001: 986: 980: 979: 961: 941: 935: 934: 916: 896: 890: 889: 861: 855: 854: 844: 820: 811: 810: 808: 806: 796: 790: 789: 787: 785: 775: 769: 768: 766: 764: 754: 748: 747: 745: 743: 733: 727: 726: 720: 712: 686: 680: 671: 665: 664: 641: 635: 634: 621: 612: 611: 609: 599: 565: 554: 553: 548:. Archived from 533: 419:5S ribosomal RNA 367:glottochronology 351:Michael Waterman 308:bioinformatician 297: 294: 292: 290: 269:Doctoral advisor 263: 205:Sociolinguistics 80: 78: 77: 54: 50: 48: 33: 19: 18: 2186: 2185: 2181: 2180: 2179: 2177: 2176: 2175: 2121: 2120: 2119: 2114: 2070:Mikhail Gelfand 2048: 1994:A. Keith Dunker 1977: 1948:Rafael Irizarry 1928:Mark Borodovsky 1906: 1875: 1861:William Pearson 1824: 1790:Andrea Califano 1773: 1759:Anna Tramontano 1754:Sarah Teichmann 1709:Helen M. Berman 1697: 1683:Thomas Lengauer 1646: 1610: 1606:Steven Salzberg 1591:Minoru Kanehisa 1586:David Eisenberg 1569: 1523: 1492: 1468:Lawrence Hunter 1451: 1405: 1392: 1362: 1353: 1351: 1342: 1341: 1337: 1327: 1325: 1316: 1315: 1311: 1300: 1299: 1295: 1285: 1283: 1274: 1273: 1269: 1260: 1258: 1252:"David Sankoff" 1250: 1249: 1242: 1223: 1219: 1209: 1207: 1203: 1202: 1198: 1167:10.2307/3212444 1147:Chvatal, Václáv 1144: 1140: 1109: 1105: 1050: 1046: 1030:10.1.1.667.3175 1009: 1005: 987: 983: 959:10.1.1.665.3156 942: 938: 914:10.1.1.667.3279 897: 893: 862: 858: 821: 814: 804: 802: 798: 797: 793: 783: 781: 777: 776: 772: 762: 760: 756: 755: 751: 741: 739: 735: 734: 730: 714: 713: 701: 687: 683: 672: 668: 642: 638: 622: 615: 566: 557: 534: 527: 523: 463: 397:variant of the 387: 359: 291:.bioinformatics 287: 261: 245: 209: 171: 130: 94:(BSc, MSc, PhD) 88:Alma mater 75: 73: 65: 55: 52: 46: 44: 36: 24: 17: 12: 11: 5: 2184: 2174: 2173: 2168: 2163: 2158: 2153: 2148: 2143: 2138: 2133: 2116: 2115: 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Amsterdam: 658: 655: 651: 648: 640: 633: 629: 625: 624:David Sankoff 620: 618: 608: 603: 598: 593: 589: 585: 581: 577: 576: 571: 564: 562: 560: 551: 547: 543: 539: 536:Anon (2017). 532: 530: 525: 515: 511: 508: 505: 502: 499: 496: 493: 490: 487: 483: 479: 476: 472: 469: 465: 464: 458: 456: 455:phylogenetics 452: 448: 444: 440: 436: 432: 428: 424: 420: 416: 412: 408: 404: 401:for pairwise 400: 396: 392: 382: 380: 376: 372: 368: 364: 354: 352: 348: 347:Pavel Pevzner 344: 340: 336: 332: 328: 324: 320: 317: 313: 309: 305: 304:David Sankoff 296: 286: 282: 278: 275: 272: 270: 266: 259: 258: 254: 252: 248: 242: 239: 237: 234: 232: 229: 227: 224: 222: 219: 218: 216: 212: 206: 203: 201: 198: 196: 193: 191: 188: 187: 185: 181: 178: 174: 167: 164: 161: 158: 155: 152: 149: 146: 143: 140: 139: 137: 133: 127: 124: 122: 119: 117: 114: 112: 109: 107: 104: 103: 101: 97: 93: 90: 86: 83: 72: 68: 63: 59: 53:(age 81) 43: 39: 32: 27: 23:David Sankoff 20: 2100:Debora Marks 2039:Eytan Ruppin 1968:Zhiping Weng 1953:Laxmi Parida 1933:Rita Casadio 1923:Judith Blake 1887:Vineet Bafna 1820:Tandy Warnow 1810:Lior Pachter 1800:Anders Krogh 1785:Alex Bateman 1769:Haim Wolfson 1719:Dan Gusfield 1632:Nir Friedman 1622:Amos Bairoch 1581:Pierre Baldi 1545:Jill Mesirov 1514:Søren Brunak 1478:Chris Sander 1473:Eugene Myers 1437:Temple Smith 1431: 1422:David Lipman 1352:. 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Index


Montreal
Quebec
Canadian
McGill University
Variable rules analysis
Code switching
Sequence alignment
Nucleic acid secondary structure
Computational genomics
Fellow of the Royal Society of Canada
Canada Research Chair
ISCB Fellow
ISCB Senior Scientist Award
Weldon Memorial Prize
Genomics
Bioinformatics
Linguistics
Sociolinguistics
University of Ottawa
Université de Montréal
Centre de Recherches Mathématiques
Canadian Institute for Advanced Research
Bureau of Statistics of Papua and New Guinea
Thesis
Historical Linguistics as a Stochastic Process
Doctoral advisor
Donald Andrew Dawson
albuquerque.bioinformatics.uottawa.ca
bioinformatician

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