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Edward Trifonov

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Another question closely related to the chromatin structure which Trifonov pursued to answer was the length of the DNA helical repeat (turn) within nucleosomes. It is known that in free DNA (i.e. DNA which is not part of a nucleosome), the DNA helix twists 360° per approximately
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Later on, Trifonov collected even 101 criteria for the amino acids order. Each criterion could be represented as a vector of length 20 (for 20 basic amino acids). Trifonov averaged over them and got the proposed temporal order of the amino acids emergence,
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can be attributed only to two triplets: GCU and GCC, the rest being their permutations or complementary counterparts. He discussed this finding with Trifonov, his friend and colleague. Trifonov had earlier discovered
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which later formed these closed loops. They supposed that the loops structure provided more stability to the sequence and thus was favored in the evolution. Modern proteins are probably a group of closed loops
222: 617:(specific for these base pairs). He called this feature curvature. Moreover, he suggested that in addition to curvature, each base pairs step could be deformed to different extent being bound to the 1230:. He collected 123 definitions by other authors. Instead of dealing with logical or philosophical arguments, he analyzed the vocabulary of the present definitions. By an approach close to the 3302:
Cohanim, Amir B.; Trifonov, Edward N.; Kashi, Yechezkel (2006). "Specific Selection Pressure at the Third Codon Positions: Contribution to 10- to 11-Base Periodicity in Prokaryotic Genomes".
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Travers, Andrew (2011). "The nature of DNA sequence preferences for nucleosome positioning. Comment on 'Cracking the chromatin code: Precise rule of nucleosome positioning' by Trifonov".
989:. In 2000, Trifonov with Berezovsky and Grosberg studied protein sequences and tried to identify simple sequential elements in proteins. They postulated that structurally diverse closed 3688: 1039:. Each fragment is represented as a node. Two fragments with certain level of similarity to each other are connected with an edge. This approach should make it possible to determine 558:
The "hinge" model: the DNA molecule was assumed to be a rigid rod-like structure interrupted by sharp kinks (up to 90°), with the straight segments being a multiple of 10 
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and co-workers. Finally, an ideal sequence of the nucleosomal DNA was derived in 2009 by Gabdank, Barash and Trifonov. The proposed sequence CGRAAATTTYCG (R standing for a
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as an associate professor. He worked there from 1976 to 1991 before moving to the Department of Structural Biology as a full professor in 1992. He was appointed professor
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protein component. The principle of this winding (and thus the rules determining nucleosome positions), was not known at the beginning of the 1980s, although multiple
637:: C or T) expresses the preferential order of the dinucleotides in the sequence of the nucleosomal DNA. However, these inferences are disputed by some scientists. 2972:
Structure and Methods, Vol. 1. Human Genome Initiative and DNA Recombination; Proceedings of the Sixth Conversation in the Discipline Biomolecular Stereodynamics
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Trifonov, Edward N. (1987). "Translation framing code and frame-monitoring mechanism as suggested by the analysis of mRNA and 16 S rRNA nucleotide sequences".
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Berezovsky, Igor N.; Grosberg, Alexander Y.; Trifonov, Edward N. (2000). "Closed loops of nearly standard size: common basic element of protein structure".
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Since GCU and GCC appeared to be the most expandable (or the most "aggressive") triplets, Trifonov and Bettecken inferred that they could be the first two
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there in 1970. He worked as a researcher at the Moscow Physico-Technical Institute from 1961 to 1964. Then he moved to the Biological Department at the
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have been now considered major factors playing a role in the nucleosome positioning. Periodicity of other dinucleotides were confirmed later by
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The codes can overlap each other so that up to 4 different codes can be identified in one DNA sequence (specifically a sequence involved in a
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in 2003. During that time, he was also a head of the Center for Genome Structure and Evolution at the Institute of Molecular Sciences in
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are not equal, but their size depends on the particular neighboring base pairs thus introducing an "anisotropic" or "wedge" model.
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Makhoul, Cameel H.; Trifonov, Edward N. (2002). "Distribution of rare triplets along mRNA and their relation to protein folding".
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Linguistic sequence complexity (LC) is a measure introduced by Trifonov in 1990. It is used for analyses and characterization of
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patterns in the chromatin DNA. They had also pointed out that those dinucleotides repeated with the same period as the estimated
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counterparts which slows down the translation process and thus provides time for the fresh-synthesized segment of a protein to
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Trifonov, Edward N. (1999). "Glycine clock: eubacteria first, archaea next, protoctista, fungi, planta and animalia at last".
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in Moscow, staying there until 1975. After his immigration to Israel, he joined the Department of Polymer Research at
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structure, investigating how certain segments of the DNA are packed inside the cells in protein-DNA complexes called
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He discovered the 3-bp and 10-bp periodicity in the DNA sequences, as well as the rules determining the curvature of
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Vaidyanathan, P.P.; Yoon, Byung-Jun (2004). "The role of signal-processing concepts in genomics and proteomics".
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The "isotropic" model: the DNA molecule is bent smoothly along its length, with the same angle between every two
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Frenkel, Zakharia M.; Trifonov, Edward N. (2008). "From protein sequence space to elementary protein modules".
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Trifonov, Edward N.; Bettecken, Thomas (1979). "Noninteger pitch and nuclease sensitivity of chromatin DNA".
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Ohyama, Takashi (2001). "Intrinsic DNA bends: an organizer of local chromatin structure for transcription".
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emerged. To address this question, they resorted to three, according to them the most natural, hypotheses:
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Trifonov, Edward N.; Berezovsky, Igor N. (2003). "Evolutionary aspects of protein structure and folding".
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Thus in his wedge model, Trifonov supposed that each combination of neighboring base pairs form a certain
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Trifonov supported the concept of smooth bending of the DNA. However, he proposed that angles between the
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The first ancient codons were GGC and GCC from which the other codons have been derived by series of
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Trifonov, Edward N. (2011b). "Cracking the chromatin code: Precise rule of nucleosome positioning".
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DNA sequences. They were the first to discover two periodical patterns in the DNA sequences, namely
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Troyanskaya, Olga G.; Arbell, Ora; Koren, Yehuda; Landau, Gad M.; Bolshoy, Alexander (2002).
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Trifonov has been a head of the Genome Diversity Center at the Institute of Evolution at the
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At the beginning of his scientific career, Trifonov studied characteristics of the DNA with
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To trace the evolution of sequences, Trifonov and Zakharia Frenkel introduced a concept of
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order). He was also the first to demonstrate that there are multiple codes present in the
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Proteins are composed of short oligopeptides derived from ancient sequences being either
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The "mini-kinks" model: Similar to the hinge model, but with smoother kinks every 5 
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Bolshoy, Alexander; McNamara, Peter; Harrington, Robert E.; Trifonov, Edward N. (1991).
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which has curvilinear shape due to slight differences in the angles between neighboring
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Since the beginning of his Israeli scientific period Trifonov has been studying the
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Trifonov, Edward N. (2008a). "Codes of biosequences". In Barbieri, Marcello (ed.).
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and he called it bending. These two features of DNA present in the nucleosomes –
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Proceedings of the National Academy of Sciences of the United States of America
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Second, third, fourth... genetic codes - One spectacular case of code crowding
3323: 2416:"Comment Attempts to Define Life Do Not Help to Understand the Origin of Life" 2380: 1183:-content of a protein can be used as a measure of the respective protein age ( 3875: 3555: 3509: 3474: 3429: 3384: 3331: 3286: 3241: 3189: 3145: 3085: 3024: 2946: 2909: 2862: 2768: 2679: 2599: 2556: 2511: 2442: 2388: 2322: 2268: 2217: 2180: 2115: 2057: 2001: 1351:
The Stanislaw Ulam Memorial Lecture at the 2003 RECOMB meeting, Berlin (2003)
1082:. Thus the combination of these two facts led them to the idea that the (GCU) 874: 793: 614: 328: 2991:"Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles" 2854: 3563: 3517: 3437: 3392: 3339: 3294: 3249: 3197: 3153: 3015: 2810: 2712: 2687: 2607: 2564: 2519: 2460: 2406: 2330: 2225: 2188: 2123: 2065: 2019: 1436: 1319: 1307: 1174: 854:
The newly synthesized protein is folded a module by module, not as a whole.
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Trifonov, Edward N. (1989). "The multiple codes of nucleotide sequences".
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They would be associated with the older one of the two known classes of
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at the middle position in the codons alternating with segments having a
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Trifonov elaborated these concepts further and proposed these notions:
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estimated the length of a nucleosomal DNA repeat to be 10.33–10.4 
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methods. After his relocation to Israel in 1976, he switched over to
344: 52: 3715:"Report about the 11th Israeli Bioinformatics Symposium, April 2008" 3163:"Loop fold structure of proteins: Resolution of Levinthal's paradox" 2786:"The pitch of chromatin DNA is reflected in its nucleotide sequence" 1894:"Theory of early molecular evolution: predictions and confirmations" 3738: 786: 372: 297: 118: 64: 412:
International Society of Gene Therapy and Molecular Biology (1997)
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is a set of rules responsible for positioning of the nucleosomes.
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has a function, i.e. contains codes, although different from the
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Trifonov, Edward N. (1990). "Making sense of the human genome".
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The Institute of Evolution, University of Haifa. Archived from
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Pérez-Martín, José; Rojo, Fernando; de Lorenzo, Víctor (1994).
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Trifonov, Edward N. (2008b). "Tracing Life back to elements".
2839:"Sequence-dependent deformational anisotropy of chromatin DNA" 2697:"Anisotropic flexibility of DNA and the nucleosomal structure" 2695:
Zhurkin, Victor B.; Lysov, Yury P.; Ivanov, Valery I. (1979).
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Discovering biomolecular mechanisms with computational biology
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appeared the first, or more generally in which order all the
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Having the suspected first two triplets, they pondered which
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The scientists started to map plant DNA in three dimensions
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Vědci začali mapovat rostlinné DNA v trojrozměrném měřítku
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Gabdank, Idan; Barash, Danny; Trifonov, Edward N. (2009).
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Genome analysis : current procedures and applications
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Editor, microbiology and biochemistry sections of Russian
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Both of these features are directed by the particular
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Trifonov strictly differentiates between two notions:
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The earliest amino acids were chemically the simplest.
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who had shown in 1980 that some of the dinucleotides (
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Poptsova, Maria S. (2014). Poptsova, Maria S. (ed.).
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Kleeman Professor of Molecular Biophysics (1982–2002)
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Protein modularity could also give an answer to the
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techniques to biological sequences. In 1980, he and
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and is known for his unorthodox scientific methods.
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International Society of Molecular Evolution (1993)
308:in Moscow. He started his scientific career in the 3795: 3600: 3355:Frenkel, Zakharia M.; Trifonov, Edward N. (2007). 3264: 3160: 2694: 1751: 1715: 1494: 1482: 1412: 1406: 741:Every triplet in the RNA sequence corresponds (is 622: 334: 3922:Moscow Institute of Physics and Technology alumni 3845: 3362:Proteins: Structure, Function, and Bioinformatics 3161:Berezovsky, Igor N.; Trifonov, Edward N. (2002). 2746: 2463:. Archived from the original on January 27, 2012. 2341:. Archived from the original on January 29, 2022. 1634: 1512: 1246: 1201:These two alphabets distinguished by the type of 587:This model was based on the work of Trifonov and 3873: 3534:Journal of Biomolecular Structure & Dynamics 3488:Journal of Biomolecular Structure & Dynamics 3222:Journal of Biomolecular Structure & Dynamics 3170:Journal of Biomolecular Structure & Dynamics 2614: 2423:Journal of Biomolecular Structure & Dynamics 2303:Journal of Biomolecular Structure & Dynamics 2159:Journal of Biomolecular Structure & Dynamics 2096:Journal of Biomolecular Structure & Dynamics 2036:Journal of Biomolecular Structure & Dynamics 1982:Journal of Biomolecular Structure & Dynamics 1466: 1298:as a result of binding to proteins (e.g. to the 1269: 1238:". This work gained multiple critical comments. 997:are universal building blocks of protein folds. 969: 884:The number of repetitions (n) can change in the 3484:"Nucleosome DNA Bendability Matrix (C-elegans)" 3407: 3354: 3219: 3056:Proceedings of the National Academy of Sciences 2790:Proceedings of the National Academy of Sciences 2783: 1739: 1727: 1537: 1521: 1454: 807: 406:The Israel National Committee for CODATA (1987) 233:; b. March 31, 1937) is a Russian-born Israeli 3798:"(list of publications by Edward N. Trifonov)" 3574:. Archived from the original on March 3, 2016. 3049: 2784:Trifonov, Edward N.; Sussman, Joel L. (1980). 2134:. Archived from the original on March 4, 2016. 2068:. Archived from the original on March 4, 2016. 939: 431:Journal of Biomolecular Structure and Dynamics 1318:While the scientific community recognize one 1000:They speculated that at the beginning of the 828:time of these codons is longer than of their 3050:Kolker, Eugene; Trifonov, Edward N. (1995). 2029:"Comment Trifonov's Meta-Definition of Life" 546:. In a nucleosome, the DNA winds around the 1857: 1335:Kurchatov Prize for Young Scientists (1969) 1323: 1313: 981:tries to address the questions of proteins 952:in the modern DNA sequences as a result of 3733: 2359: 1975: 1871: 1545: 1525: 1460: 1054:Molecular evolution and the origin of life 700:Trifonov recognizes specific codes in the 365:I. V. Kurchatov Institute of Atomic Energy 357:Moscow Institute of Physics and Technology 355:Trifonov graduated in biophysics from the 141:I. V. Kurchatov Institute of Atomic Energy 137:Moscow Institute of Physics and Technology 75:Moscow Institute of Physics and Technology 29: 3819:"Can Science Define Life In Three Words?" 3545: 3524: 3499: 3444: 3374: 3093: 3075: 3032: 3014: 2870: 2819: 2809: 2720: 2628: 2589: 2526: 2450: 2396: 2276: 2258: 2170: 2047: 2009: 1921: 1804: 1780: 1691: 1675: 1654: 1638: 1610: 1578: 1549: 1338:Kurchatov Prize for Basic Research (1971) 1236:Life is self-reproduction with variations 1205:in the middle positions within triplets ( 677:contrary to the generally recognized one 664: 386:in Israel since 2002, and a professor at 3852:. Prague, Czech Republic. Archived from 3774: 3664:] (in Czech). Brno, Czech Republic: 3654: 3110: 2969: 2924: 2887: 2836: 2026: 1948: 1891: 1847: 1824: 1792: 1768: 1704:Berezovsky, Grosberg & Trifonov 2000 1687: 1595:Pérez-Martín, Rojo & de Lorenzo 1994 1541: 1506: 1470: 1430: 1391: 913: 860: 846:Berezovsky, Grosberg & Trifonov 2000 763: 720: 338: 3846:Trifonov, Edward N. (lecturer) (2010). 3624: 2645: 2481: 2413: 1820: 1622: 1418: 1114:Consensus temporal order of amino acids 202:question marks, boxes, or other symbols 3874: 3816: 2296:"A Conversation on Definition of Life" 2195: 2152: 2086: 1976:Cui, Feng; Zhurkin, Victor B. (2010). 1832: 1828: 1816: 1561: 1234:, he derived a consensus definition: " 1023:based on the protein modules. It is a 533: 510:Trifonov pioneered the application of 436:Editorial board and associate editor, 3267:Current Opinion in Structural Biology 2362:"What controls nucleosome positions?" 2360:Segal, Eran; Widom, Jonathan (2009). 2293: 1836: 359:in 1961 and earned his PhD degree in 3608:. Spring–Summer 1999. Archived from 1968: 1864:ISBCB Distinguished Membership Award 1443:ISBCB Distinguished Membership Award 689:. He points out that even so called 292:Trifonov was born in Leningrad (now 2740:Scientific papers – primary sources 1953:. Norfolk: Caister Academic Press. 1607:Gabdank, Barash & Trifonov 2009 1086:could reflect a pattern of ancient 669:Trifonov advocates the notion that 554:had been suggested. These included 506:Periodicity in biological sequences 474:Biomolecular Structure and Dynamics 252:molecules and their bending within 217: 13: 3887:Academic staff of Ariel University 3625:Trifonov, Edward N. (April 2010). 3113:Gene Therapy and Molecular Biology 1651:Cohanim, Trifonov & Kashi 2006 1361:Distinguished Membership Award of 1242:Research techniques and approaches 866:are present in all three types of 817:are placed in the distance of 150 460:Gene Therapy and Molecular Biology 264:theory of the origin of life, and 14: 3933: 3839: 2617:Journal of the Franklin Institute 1372:, South Bend, Indiana, USA (2009) 1346:Lomonosov Moscow State University 1222:A part of Trifonov's work on the 956:of ancient independent sequences. 851:Proteins are composed of modules. 734:RNA-to-protein translation code ( 500: 369:The Weizmann Institute of Science 2927:Bulletin of Mathematical Biology 1495:Zhurkin, Lysov & Ivanov 1979 1322:, Trifonov promotes the idea of 1133:They would be present among the 892:which may (or may not) help the 530:and 10-11bp (10.4) periodicity. 304:. As a result, he went to study 182: 2639:10.1016/j.jfranklin.2003.12.001 2591:10.1093/bioinformatics/18.5.679 1841: 1810: 1681: 1644: 1628: 1600: 1584: 1531: 781:which is complementary to (xxC) 403:USSR Biochemical Society (1970) 398:Membership of learned societies 335:Education and scientific career 204: instead of Hebrew letters. 3501:10.1080/07391102.2009.10507255 3304:Journal of Molecular Evolution 3234:10.1080/07391102.2002.10506859 3182:10.1080/07391102.2002.10506817 2260:10.1128/MMBR.58.2.268-290.1994 1896:. In Eisenhaber, Frank (ed.). 1752:Berezovsky & Trifonov 2002 1716:Trifonov & Berezovsky 2003 1264: 1253:Linguistic sequence complexity 1247:Linguistic sequence complexity 1035:obtained from a collection of 467:Journal of Integrative Biology 438:Journal of Molecular Evolution 16:Israeli molecular biophysicist 1: 3821:. Science 2.0. Archived from 3525:Trifonov, Edward N. (2011a). 3279:10.1016/S0959-440X(03)00005-8 3138:10.1016/S0014-5793(00)01091-7 1879: 1635:Trifonov & Bettecken 1979 1370:Indiana University South Bend 1368:Distinguished Citizen Fellow 1270:DNA curvature vs. DNA bending 1226:is his aim to find a concise 1043:of uncharacterized proteins. 970:Modular structure of proteins 417:Editorial and advisory Boards 394:, Czech Republic since 2007. 145:Weizmann Institute of Science 2902:10.1016/0022-2836(87)90241-5 2890:Journal of Molecular Biology 2837:Trifonov, Edward N. (1980). 2294:Sarma, Ramaswamy H. (2012). 1892:Trifonov, Edward N. (2006). 1467:Vaidyanathan & Yoon 2004 1376: 1232:Principal component analysis 445:College of Judea and Samaria 287: 210:Edward Nikolayevich Trifonov 23:Edward Nikolayevich Trifonov 7: 3681: 3594: 3467:10.1016/j.plrev.2008.03.001 2672:10.1016/j.plrev.2011.02.001 2646:Zhurkin, Victor B. (2011). 2549:10.1016/j.plrev.2011.01.004 2504:10.1016/j.plrev.2011.01.010 1932:10.1007/978-1-4020-6340-4_1 1868:ISBCB 11th Symposium report 1740:Frenkel & Trifonov 2008 1728:Frenkel & Trifonov 2007 1538:Trifonov & Sussman 1980 1522:Trifonov & Sussman 1980 1455:Trifonov & Sussman 1980 909:codes of evolutionary past 808:Makhoul & Trifonov 2002 480: 10: 3938: 3902:Soviet emigrants to Israel 3756:"Edward N. Trifonov Ph.D." 3547:10.1080/073911011010524992 3422:10.1016/j.gene.2007.10.024 2435:10.1080/073911012010524998 2315:10.1080/073911012010524997 2172:10.1080/073911012010525002 2108:10.1080/073911012010525000 2087:Koonin, Eugene V. (2012). 2049:10.1080/073911012010524999 2027:Di Mauro, Ernesto (2012). 1994:10.1080/073911010010524947 1250: 1173:Evolutionary table of the 1161:being the first two ones. 1146:aminoacyl-tRNA synthetases 1068:triplet expansion diseases 940:Kolker & Trifonov 1995 938:genome segmentation code ( 806:translation pausing code ( 759:; still poorly identified. 755:is a code responsible for 472:Editorial advisory board, 465:Editorial board of OMICS, 3892:Israeli bioinformaticians 3636:(36): 2–3. Archived from 3584:: CS1 maint: unfit URL ( 3324:10.1007/s00239-005-0258-1 2473:: CS1 maint: unfit URL ( 2414:Szostak, Jack W. (2012). 2381:10.1016/j.tig.2009.06.002 2351:: CS1 maint: unfit URL ( 2144:: CS1 maint: unfit URL ( 2078:: CS1 maint: unfit URL ( 1329: 1124:proteinogenic amino acids 1066:noticed that most of the 792:It maintains the correct 512:digital signal processing 237:and a founder of Israeli 230: 174: 166: 154: 132: 110: 103: 80: 70: 60: 37: 28: 21: 3648: 3602:"The First Genetic Word" 1885: 1314:(Multiple) Genetic codes 1027:arrangement of sequence 948:tend to occur every 400 873:They are represented by 645:. In 1979, Trifonov and 455:, West Bank) (1994–1999) 443:Academic Council of the 161:Yuri Semenovich Lazurkin 3447:Physics of Life Reviews 2652:Physics of Life Reviews 2529:Physics of Life Reviews 2484:Physics of Life Reviews 2247:Microbiological Reviews 2153:Mittal, Aditya (2012). 1852:Troyanskaya et al. 2002 1407:Interface Magazine 1999 1198:(thus two "alphabets"). 1165:Results and predictions 1037:fully sequenced genomes 859:fast adaptation codes ( 3917:Scientists from Moscow 3297:. ISI:000181133300015. 3016:10.1073/pnas.88.6.2312 2843:Nucleic Acids Research 2811:10.1073/pnas.77.7.3816 2701:Nucleic Acids Research 1546:Cui & Zhurkin 2010 1526:Cui & Zhurkin 2010 1483:Trifonov: Publications 1354:Mendel Lecture, Brno, 1324:multiple genetic codes 1139:Miller–Urey experiment 974:Trifonov's concept of 902:environmental pressure 844:protein folding code ( 665:Multiple genetic codes 424:"Biological Abstracts" 352: 235:molecular biophysicist 190:This section contains 3912:Scientists from Haifa 3897:Israeli biophysicists 3077:10.1073/pnas.92.2.557 2855:10.1093/nar/8.17.4041 1344:Adjunct Professor of 1251:Further information: 841:in protein sequences 623:curvature and bending 377:Palo Alto, California 342: 317:(immigrated as a Jew) 258:structure of proteins 3804:on 28 September 2013 3796:Trifonov, Edward N. 3783:on 28 September 2013 3777:"(Curriculum Vitae)" 3775:Trifonov, Edward N. 3754:Trifonov, Edward N. 2713:10.1093/nar/6.3.1081 1259:biological sequences 1031:of the length of 20 868:biological sequences 671:biological sequences 495:biological sequences 361:molecular biophysics 243:biological sequences 123:molecular biophysics 3762:on 20 February 2012 3459:2008PhLRv...5..121T 3316:2006JMolE..63..393C 3068:1995PNAS...92..557K 3007:1991PNAS...88.2312B 2802:1980PNAS...77.3816T 2761:10.1021/bi00570a011 2664:2011PhLRv...8...64Z 2541:2011PhLRv...8...39T 2496:2011PhLRv...8...53T 1591:Bolshoy et al. 1991 1356:Abbey of St. Thomas 1281:a property of free 1224:molecular evolution 1048:Levinthal's paradox 1004:, there were short 995:amino acid residues 534:Chromatin structure 458:Editorial board of 384:University of Haifa 312:. In 1976, he made 266:molecular evolution 149:University of Haifa 98:molecular evolution 3701:on 10 January 2012 3643:on 5 January 2011. 3606:Interface Magazine 3376:10.1002/prot.21325 2939:10.1007/BF02460081 2369:Trends in Genetics 1548:, p. 822 and 1228:definition of life 1218:Definition of life 1106:advantage. Single 1094:The first triplets 1080:consensus sequence 1006:polypeptide chains 771:consensus sequence 661:analysis in 2006. 633:: A or G, Y for a 388:Masaryk University 353: 2849:(17): 4041–4054. 2210:10.1002/bies.1100 1969:Scientific papers 1941:978-1-4020-6339-8 1924:The Codes of Life 1907:978-0-387-34527-7 1294:a deformation of 888:as a response to 813:Clusters of rare 731:in RNA sequences 716:in DNA sequences 627:Alexander Bolshoy 282:protein sequences 260:. He proposed an 198:rendering support 178: 177: 167:Doctoral students 105:Scientific career 94:protein structure 84:DNA periodicity, 3929: 3868: 3866: 3864: 3858: 3834: 3832: 3830: 3825:on 16 March 2012 3813: 3811: 3809: 3792: 3790: 3788: 3771: 3769: 3767: 3750: 3748: 3746: 3730: 3728: 3726: 3721:on 20 March 2012 3710: 3708: 3706: 3700: 3693: 3677: 3675: 3673: 3666:Czech Television 3644: 3642: 3634:Informační Listy 3631: 3621: 3619: 3617: 3589: 3583: 3575: 3549: 3531: 3521: 3503: 3478: 3441: 3404: 3378: 3351: 3298: 3261: 3216: 3214: 3208:. Archived from 3167: 3157: 3132:(2–3): 283–286. 3120: 3107: 3097: 3079: 3046: 3036: 3018: 2985: 2966: 2921: 2884: 2874: 2833: 2823: 2813: 2796:(7): 3816–3820. 2780: 2734: 2724: 2707:(3): 1081–1096. 2691: 2642: 2632: 2623:(1–2): 111–135. 2611: 2593: 2568: 2523: 2478: 2472: 2464: 2454: 2420: 2410: 2400: 2366: 2356: 2350: 2342: 2300: 2290: 2280: 2262: 2237: 2192: 2174: 2149: 2143: 2135: 2093: 2083: 2077: 2069: 2051: 2033: 2023: 2013: 1964: 1945: 1918: 1916: 1914: 1874: 1861: 1855: 1845: 1839: 1814: 1808: 1802: 1796: 1790: 1784: 1778: 1772: 1766: 1755: 1749: 1743: 1737: 1731: 1725: 1719: 1713: 1707: 1701: 1695: 1685: 1679: 1673: 1658: 1648: 1642: 1632: 1626: 1620: 1614: 1604: 1598: 1588: 1582: 1576: 1565: 1559: 1553: 1535: 1529: 1519: 1510: 1504: 1498: 1492: 1486: 1480: 1474: 1464: 1458: 1452: 1446: 1440: 1434: 1428: 1422: 1416: 1410: 1404: 1395: 1389: 1060:Thomas Bettecken 821:from each other. 745:) to a specific 719:chromatin code ( 659:crystallographic 647:Thomas Bettecken 294:Saint Petersburg 232: 225: 219: 186: 156:Doctoral advisor 48: 46: 33: 19: 18: 3937: 3936: 3932: 3931: 3930: 3928: 3927: 3926: 3872: 3871: 3862: 3860: 3856: 3842: 3837: 3828: 3826: 3807: 3805: 3786: 3784: 3765: 3763: 3744: 3742: 3724: 3722: 3704: 3702: 3698: 3691: 3684: 3671: 3669: 3651: 3640: 3629: 3615: 3613: 3612:on 15 June 2022 3597: 3592: 3577: 3576: 3529: 3212: 3165: 2982: 2742: 2737: 2466: 2465: 2418: 2364: 2344: 2343: 2298: 2137: 2136: 2091: 2071: 2070: 2031: 1971: 1961: 1942: 1912: 1910: 1908: 1888: 1882: 1877: 1870: 1866: 1862: 1858: 1846: 1842: 1835: 1831: 1827: 1823: 1819: 1815: 1811: 1803: 1799: 1791: 1787: 1779: 1775: 1767: 1758: 1750: 1746: 1738: 1734: 1726: 1722: 1714: 1710: 1702: 1698: 1686: 1682: 1674: 1661: 1649: 1645: 1633: 1629: 1621: 1617: 1605: 1601: 1589: 1585: 1577: 1568: 1560: 1556: 1536: 1532: 1520: 1513: 1509:, p. 4041. 1505: 1501: 1497:, p. 1081. 1493: 1489: 1481: 1477: 1465: 1461: 1453: 1449: 1441: 1437: 1429: 1425: 1417: 1413: 1405: 1398: 1390: 1383: 1379: 1332: 1316: 1300:histone octamer 1272: 1267: 1255: 1249: 1244: 1108:point mutations 1085: 1075:to be a hidden 1074: 1056: 987:protein folding 972: 921:point mutations 880: 784: 780: 667: 619:histone octamer 536: 520:autocorrelation 508: 503: 483: 349:Andrei Sakharov 337: 290: 276:to present-day 231:Эдуapд Тpифoнoв 221: 218:אדוארד טריפונוב 207: 206: 205: 196:Without proper 187: 147: 143: 139: 71:Alma mater 56: 50: 44: 42: 24: 17: 12: 11: 5: 3935: 3925: 3924: 3919: 3914: 3909: 3904: 3899: 3894: 3889: 3884: 3870: 3869: 3841: 3840:External links 3838: 3836: 3835: 3817:Zimmer, Carl. 3814: 3793: 3772: 3751: 3731: 3711: 3683: 3680: 3679: 3678: 3650: 3647: 3646: 3645: 3622: 3596: 3593: 3591: 3590: 3540:(2): 259–266. 3522: 3494:(4): 403–411. 3479: 3453:(2): 121–132. 3442: 3416:(1–2): 64–71. 3405: 3369:(2): 271–284. 3352: 3310:(3): 393–400. 3299: 3273:(1): 110–114. 3262: 3228:(3): 413–420. 3217: 3215:on 2005-02-12. 3158: 3121: 3108: 3062:(2): 557–560. 3047: 2986: 2980: 2967: 2933:(4): 417–432. 2922: 2896:(4): 643–652. 2885: 2834: 2781: 2755:(3): 454–456. 2743: 2741: 2738: 2736: 2735: 2692: 2643: 2630:10.1.1.72.6984 2612: 2584:(5): 679–688. 2578:Bioinformatics 2569: 2524: 2479: 2429:(4): 599–600. 2411: 2375:(8): 335–343. 2357: 2309:(4): 597–598. 2291: 2253:(2): 268–290. 2238: 2204:(8): 708–715. 2193: 2165:(4): 609–611. 2150: 2102:(4): 603–605. 2084: 2042:(4): 601–602. 2024: 1988:(6): 821–841. 1972: 1970: 1967: 1966: 1965: 1959: 1946: 1940: 1919: 1906: 1887: 1884: 1883: 1881: 1878: 1876: 1875: 1872:ISBCB homepage 1856: 1840: 1809: 1805:Trifonov 2011a 1797: 1785: 1781:Trifonov 2008b 1773: 1756: 1744: 1732: 1720: 1708: 1696: 1692:Trifonov 2008a 1680: 1676:Trifonov 2008a 1659: 1655:Trifonov 2011b 1643: 1639:Trifonov 2011b 1627: 1615: 1611:Trifonov 2011b 1599: 1583: 1579:Trifonov 2011b 1566: 1564:, p. 708. 1554: 1550:Trifonov 2011b 1530: 1511: 1499: 1487: 1475: 1459: 1447: 1435: 1423: 1411: 1396: 1380: 1378: 1375: 1374: 1373: 1366: 1359: 1352: 1349: 1342: 1339: 1336: 1331: 1328: 1315: 1312: 1304: 1303: 1292: 1289: 1279: 1271: 1268: 1266: 1263: 1248: 1245: 1243: 1240: 1215: 1214: 1199: 1188: 1178: 1150: 1149: 1142: 1131: 1083: 1072: 1055: 1052: 1021:sequence space 971: 968: 960: 959: 958: 957: 943: 936: 931:in the middle 917: 907: 906: 905: 882: 878: 875:tandem repeats 871: 857: 856: 855: 852: 849: 839: 838: 837: 822: 811: 804: 790: 782: 778: 767: 762:framing code ( 760: 753: 750: 739: 729: 728: 727: 724: 691:non-coding DNA 666: 663: 578: 577: 570: 563: 535: 532: 507: 504: 502: 501:Research areas 499: 491:bioinformatics 482: 479: 478: 477: 470: 463: 456: 441: 434: 427: 414: 413: 410: 407: 404: 336: 333: 289: 286: 239:bioinformatics 200:, you may see 188: 181: 180: 179: 176: 175: 172: 171: 168: 164: 163: 158: 152: 151: 134: 130: 129: 115:Bioinformatics 112: 108: 107: 101: 100: 82: 81:Known for 78: 77: 72: 68: 67: 62: 58: 57: 51: 41:March 31, 1937 39: 35: 34: 26: 25: 22: 15: 9: 6: 4: 3: 2: 3934: 3923: 3920: 3918: 3915: 3913: 3910: 3908: 3907:Living people 3905: 3903: 3900: 3898: 3895: 3893: 3890: 3888: 3885: 3883: 3880: 3879: 3877: 3859:on 2010-10-10 3855: 3851: 3850: 3844: 3843: 3824: 3820: 3815: 3803: 3799: 3794: 3782: 3778: 3773: 3761: 3757: 3752: 3741:on 2009-05-10 3740: 3736: 3732: 3720: 3716: 3712: 3697: 3690: 3686: 3685: 3667: 3663: 3659: 3658: 3653: 3652: 3639: 3635: 3628: 3623: 3611: 3607: 3603: 3599: 3598: 3587: 3581: 3573: 3569: 3565: 3561: 3557: 3553: 3548: 3543: 3539: 3535: 3528: 3523: 3519: 3515: 3511: 3507: 3502: 3497: 3493: 3489: 3485: 3480: 3476: 3472: 3468: 3464: 3460: 3456: 3452: 3448: 3443: 3439: 3435: 3431: 3427: 3423: 3419: 3415: 3411: 3406: 3402: 3398: 3394: 3390: 3386: 3382: 3377: 3372: 3368: 3364: 3363: 3358: 3353: 3349: 3345: 3341: 3337: 3333: 3329: 3325: 3321: 3317: 3313: 3309: 3305: 3300: 3296: 3292: 3288: 3284: 3280: 3276: 3272: 3268: 3263: 3259: 3255: 3251: 3247: 3243: 3239: 3235: 3231: 3227: 3223: 3218: 3211: 3207: 3203: 3199: 3195: 3191: 3187: 3183: 3179: 3175: 3171: 3164: 3159: 3155: 3151: 3147: 3143: 3139: 3135: 3131: 3127: 3122: 3118: 3114: 3109: 3105: 3101: 3096: 3091: 3087: 3083: 3078: 3073: 3069: 3065: 3061: 3057: 3053: 3048: 3044: 3040: 3035: 3030: 3026: 3022: 3017: 3012: 3008: 3004: 3001:(6): 2312–6. 3000: 2996: 2992: 2987: 2983: 2981:0-940030-29-2 2977: 2973: 2968: 2964: 2960: 2956: 2952: 2948: 2944: 2940: 2936: 2932: 2928: 2923: 2919: 2915: 2911: 2907: 2903: 2899: 2895: 2891: 2886: 2882: 2878: 2873: 2868: 2864: 2860: 2856: 2852: 2848: 2844: 2840: 2835: 2831: 2827: 2822: 2817: 2812: 2807: 2803: 2799: 2795: 2791: 2787: 2782: 2778: 2774: 2770: 2766: 2762: 2758: 2754: 2750: 2745: 2744: 2732: 2728: 2723: 2718: 2714: 2710: 2706: 2702: 2698: 2693: 2689: 2685: 2681: 2677: 2673: 2669: 2665: 2661: 2657: 2653: 2649: 2644: 2640: 2636: 2631: 2626: 2622: 2618: 2613: 2609: 2605: 2601: 2597: 2592: 2587: 2583: 2579: 2575: 2570: 2566: 2562: 2558: 2554: 2550: 2546: 2542: 2538: 2534: 2530: 2525: 2521: 2517: 2513: 2509: 2505: 2501: 2497: 2493: 2489: 2485: 2480: 2476: 2470: 2462: 2458: 2453: 2448: 2444: 2440: 2436: 2432: 2428: 2424: 2417: 2412: 2408: 2404: 2399: 2394: 2390: 2386: 2382: 2378: 2374: 2370: 2363: 2358: 2354: 2348: 2340: 2336: 2332: 2328: 2324: 2320: 2316: 2312: 2308: 2304: 2297: 2292: 2288: 2284: 2279: 2274: 2270: 2266: 2261: 2256: 2252: 2248: 2244: 2239: 2235: 2231: 2227: 2223: 2219: 2215: 2211: 2207: 2203: 2199: 2194: 2190: 2186: 2182: 2178: 2173: 2168: 2164: 2160: 2156: 2151: 2147: 2141: 2133: 2129: 2125: 2121: 2117: 2113: 2109: 2105: 2101: 2097: 2090: 2085: 2081: 2075: 2067: 2063: 2059: 2055: 2050: 2045: 2041: 2037: 2030: 2025: 2021: 2017: 2012: 2007: 2003: 1999: 1995: 1991: 1987: 1983: 1979: 1974: 1973: 1962: 1960:9781908230294 1956: 1952: 1947: 1943: 1937: 1933: 1929: 1925: 1920: 1909: 1903: 1899: 1895: 1890: 1889: 1873: 1869: 1865: 1860: 1854:, p. 680 1853: 1849: 1848:Trifonov 1990 1844: 1838: 1834: 1830: 1826: 1825:Di Mauro 2012 1822: 1818: 1813: 1806: 1801: 1794: 1793:Trifonov 1999 1789: 1782: 1777: 1770: 1769:Trifonov 2006 1765: 1763: 1761: 1753: 1748: 1741: 1736: 1729: 1724: 1717: 1712: 1705: 1700: 1693: 1689: 1688:Trifonov 1980 1684: 1677: 1672: 1670: 1668: 1666: 1664: 1656: 1652: 1647: 1640: 1636: 1631: 1625:, p. 54. 1624: 1619: 1612: 1608: 1603: 1597:, p. 268 1596: 1592: 1587: 1580: 1575: 1573: 1571: 1563: 1558: 1551: 1547: 1543: 1542:Trifonov 1980 1539: 1534: 1528:, p. 822 1527: 1523: 1518: 1516: 1508: 1507:Trifonov 1980 1503: 1496: 1491: 1484: 1479: 1473:, p. 128 1472: 1471:Poptsova 2014 1468: 1463: 1456: 1451: 1444: 1439: 1432: 1427: 1420: 1415: 1408: 1403: 1401: 1393: 1392:Czech TV 2011 1388: 1386: 1381: 1371: 1367: 1364: 1360: 1357: 1353: 1350: 1347: 1343: 1340: 1337: 1334: 1333: 1327: 1325: 1321: 1311: 1309: 1301: 1297: 1293: 1290: 1288: 1284: 1280: 1277: 1276: 1275: 1262: 1260: 1254: 1239: 1237: 1233: 1229: 1225: 1220: 1219: 1212: 1208: 1204: 1200: 1197: 1196:oligoglycines 1193: 1192:oligoalanines 1189: 1186: 1185:Glycine clock 1182: 1179: 1176: 1172: 1171: 1170: 1167: 1166: 1162: 1160: 1156: 1147: 1143: 1140: 1136: 1132: 1129: 1128: 1127: 1125: 1121: 1116: 1115: 1111: 1109: 1105: 1101: 1096: 1095: 1091: 1089: 1081: 1078: 1069: 1065: 1061: 1051: 1049: 1044: 1042: 1038: 1034: 1030: 1026: 1022: 1019: 1014: 1012: 1007: 1003: 998: 996: 992: 988: 984: 980: 977: 967: 965: 955: 951: 947: 944: 941: 937: 934: 930: 926: 922: 918: 915: 914:Trifonov 2006 912:binary code ( 911: 910: 908: 903: 899: 895: 891: 887: 883: 876: 872: 869: 865: 864: 862: 861:Trifonov 1989 858: 853: 850: 847: 843: 842: 840: 835: 831: 827: 823: 820: 816: 812: 809: 805: 802: 799: 795: 794:reading frame 791: 788: 776: 772: 768: 765: 764:Trifonov 1987 761: 758: 754: 752:splicing code 751: 748: 744: 740: 737: 733: 732: 730: 725: 722: 721:Trifonov 1980 718: 717: 715: 714: 713: 711: 707: 703: 698: 696: 692: 688: 684: 680: 676: 672: 662: 660: 656: 652: 648: 644: 638: 636: 632: 628: 624: 620: 616: 611: 609: 605: 601: 597: 594: 590: 585: 583: 575: 571: 568: 564: 561: 557: 556: 555: 553: 549: 545: 541: 531: 529: 525: 521: 517: 513: 498: 496: 492: 488: 475: 471: 468: 464: 461: 457: 454: 450: 446: 442: 439: 435: 432: 428: 425: 421: 420: 419: 418: 411: 408: 405: 402: 401: 400: 399: 395: 393: 389: 385: 380: 379:(1992–1995). 378: 374: 370: 366: 362: 358: 350: 346: 341: 332: 330: 329:Gregor Mendel 326: 322: 318: 315: 311: 307: 303: 299: 295: 285: 283: 279: 275: 271: 267: 263: 259: 255: 251: 246: 244: 240: 236: 228: 224: 215: 211: 203: 199: 195: 193: 185: 173: 170:Jaime Lagunez 169: 165: 162: 159: 157: 153: 150: 146: 142: 138: 135: 131: 128: 124: 120: 116: 113: 109: 106: 102: 99: 95: 92:positioning, 91: 87: 83: 79: 76: 73: 69: 66: 63: 59: 54: 49:(age 87) 40: 36: 32: 27: 20: 3861:. 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Index


Leningrad
Israeli
Moscow Institute of Physics and Technology
DNA
nucleosome
protein structure
molecular evolution
Bioinformatics
genomics
molecular biophysics
proteomics
Moscow Institute of Physics and Technology
I. V. Kurchatov Institute of Atomic Energy
Weizmann Institute of Science
University of Haifa
Doctoral advisor
Yuri Semenovich Lazurkin
שָׁלוֹם
Hebrew text
rendering support
question marks, boxes, or other symbols
Hebrew
‹See Tfd›
Russian
molecular biophysicist
bioinformatics
biological sequences
DNA
nucleosomes

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